Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq72 118 7e-22 >seq72 Length=2559699 Score = 118 bits (130), Expect = 7e-22 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||||| |||||||||| || || | |||||| ||||| || ||||| ||||| || || Sbjct 2420991 CATGTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATC 2420932 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || ||||| | |||||| || |||| ||||| | ||| || ||||| || Sbjct 2420931 CCCCTCCTCCCTCTCTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATC 2420872 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||||||||| || || ||||| || ||||| |||| ||||| || || Sbjct 2420871 CCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGGCATTTGTTGATCC 2420824 Score = 100 bits (110), Expect = 2e-16 Identities = 120/162 (74%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || || |||| || || |||||||| ||||| || ||||||||||||||| || || Sbjct 2421889 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 2421830 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | ||||||| | | || | |||||| |||||||| || ||||| |||||| Sbjct 2421829 ACGCCCAGACCCATGT-CGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTCGCA 2421771 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 ||||| |||||||| | || | ||| || || || || || Sbjct 2421770 GACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCAT 2421729 Score = 82.4 bits (90), Expect = 5e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 25422 TTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCT 25481 ||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||| || Sbjct 2422046 TTCAGAGGTTCGATGTGATTGAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAAGTCA 2421987 Query 25482 CCCGG 25486 || || Sbjct 2421986 CCGGG 2421982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340121080473405