Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq70 183 5e-42
seq131 178 2e-40
seq74 168 1e-37
seq2808 163 4e-36
seq639 163 4e-36
seq342 147 3e-31
seq372 136 6e-28
>seq70
Length=2523309
Score = 183 bits (202), Expect = 5e-42
Identities = 207/276 (75%), Gaps = 1/276 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 64537 CGCCAAGCGTCACCGTAAAGTCCTCCGCGATAACATCCAGGGAATCACCAAGCCCGCTAT 64478
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||| |||||||| || ||||||||||||||| |||| || | |||| || ||||
Sbjct 64477 TCGTCGCCTGGCTCGCCGCGGTGGAGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 64418
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| |||||||| |||||| || |||||||||
Sbjct 64417 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTTATCCGTGATGCCGTCACCTATACCGA 64358
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || || || | || | || ||
Sbjct 64357 GCACGCCAAGAGGAAGACCGTGACCGCCATGGATGTGGTGTACGCTCTCAAGAGGCAGGG 64298
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTT-AATCTTCTA 16706
||| | | || || || || ||| ||||| |||
Sbjct 64297 CCGCACTCTGTACGGCTTCGGTGGTTAAATCTACTA 64262
Score = 168 bits (186), Expect = 1e-37
Identities = 183/243 (75%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 2571 CGCCAAGCGTCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 2630
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||| |||||||| || |||||||||||||| |||| || | |||| || ||||
Sbjct 2631 TCGTCGCCTGGCTCGCCGCGGTGGAGTCAAGCGCATCTCCGGTCTCATCTACGAGGAGAC 2690
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| |||||| || ||| |||||
Sbjct 2691 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 2750
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || || || | || | || ||
Sbjct 2751 GCACGCCAAGAGGAAGACCGTGACCGCCATGGATGTAGTGTACGCTCTCAAGAGGCAGGG 2810
Query 16672 CCG 16674
|||
Sbjct 2811 CCG 2813
Score = 168 bits (186), Expect = 1e-37
Identities = 183/243 (75%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 11530 CGCCAAGCGTCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 11471
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||| |||||||| |||||||| ||||||||| |||| || | |||| || ||||
Sbjct 11470 TCGTCGCCTGGCTCGCCGTGGTGGGGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 11411
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| | ||| | ||| |||||||| |||||| || ||| |||||
Sbjct 11410 CCGCGGTGTGCTCAAGGTTTTCTTGGAGAACGTTATCCGTGATGCCGTCACCTACACCGA 11351
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || || || | || | || ||
Sbjct 11350 GCACGCCAAGAGGAAGACCGTGACCGCCATGGATGTAGTGTACGCTCTCAAGAGGCAGGG 11291
Query 16672 CCG 16674
|||
Sbjct 11290 CCG 11288
Score = 159 bits (176), Expect = 5e-35
Identities = 181/243 (74%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 73340 CGCCAAGCGTCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 73281
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||| |||||||| || ||||||||||||||| |||| || | |||| || ||||
Sbjct 73280 TCGTCGCCTGGCTCGCCGCGGTGGAGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 73221
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| | ||||| ||| ||| |||| |||||| || ||| || ||
Sbjct 73220 CCGCGGTGTGCTCAAGGTTTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACAGA 73161
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| | |||||| | || || || | || | || ||
Sbjct 73160 GCACGCCAAGAGGAAGACCGTGACCGCTATGGATGTGGTGTACGCTCTCAAGAGGCAGGG 73101
Query 16672 CCG 16674
|||
Sbjct 73100 CCG 73098
>seq131
Length=1703701
Score = 178 bits (196), Expect = 2e-40
Identities = 209/283 (74%), Gaps = 0/283 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| |||||||||||||| |||||
Sbjct 303797 CGCCAAGCGTCACCGTAAGGTTCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 303738
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| |||||||||||||| || ||||| |||||| | || || | |||| || ||||
Sbjct 303737 CCGCCGTCTGGCTCGTCGCGGGGGAGTTAAGCGTATTTCCGGTCTCATCTACGAGGAGAC 303678
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 303677 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 303618
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| ||||||| | || || || |||| | || ||
Sbjct 303617 GCACGCCAAGAGGAAGACCGTCACCGCCATGGACGTGGTGTACGCTCTGAAGAGGCAGGG 303558
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATCAAACT 16714
||| | | || || || ||| ||||| || || ||| |||
Sbjct 303557 CCGCACTCTGTACGGCTTCGGAGGTTAAACTGCTCCTCATACT 303515
Score = 174 bits (192), Expect = 2e-39
Identities = 203/274 (74%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| |||||||||||||| |||||
Sbjct 255172 CGCCAAGCGTCACCGTAAGGTTCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 255231
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || |||||||||||| |||| || | |||| || ||||
Sbjct 255232 CCGCCGTCTGGCTCGCCGCGGGGGAGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 255291
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 255292 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 255351
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| ||||||| | || || || | || | || ||
Sbjct 255352 GCACGCCAAGAGGAAGACCGTCACCGCCATGGACGTGGTGTACGCTCTCAAGAGGCAGGG 255411
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
||| | | || || || ||| ||||| || ||
Sbjct 255412 CCGCACTCTGTACGGCTTCGGAGGTTAAACTGCT 255445
>seq74
Length=2468174
Score = 168 bits (186), Expect = 1e-37
Identities = 198/268 (74%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| |||||||||||||| |||||
Sbjct 2305652 CGCCAAGCGTCACCGTAAGGTTCTCCGCGATAACATCCAGGGAATCACCAAGCCCGCTAT 2305593
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || |||||||||||| | || || | |||| || ||||
Sbjct 2305592 CCGCCGTCTGGCTCGCCGCGGGGGAGTCAAGCGTATTTCCGGTCTCATCTACGAGGAGAC 2305533
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 2305532 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 2305473
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| ||||||| | || || || | || | || ||
Sbjct 2305472 GCACGCCAAGAGGAAGACCGTCACCGCCATGGACGTGGTGTACGCTCTCAAGAGGCAGGG 2305413
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 2305412 CCGCACTCTGTACGGCTTCGGAGGTTAA 2305385
>seq2808
Length=3352
Score = 163 bits (180), Expect = 4e-36
Identities = 197/268 (74%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || || ||||||||||| |||||||||||||| || ||
Sbjct 3110 CGCCAAGCGCCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCGGCCAT 3051
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || ||||||||||| |||| || | |||| || ||||
Sbjct 3050 CCGCCGTCTGGCTCGCCGCGGCGGAGTCAAGCGAATCTCCGGCCTCATCTACGAGGAGAC 2991
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| |||||| | ||||| ||| ||| |||| ||| || | || |||||
Sbjct 2990 CCGCGGTGTGTTGAAGGTGTTCCTGGAGAACGTGATCCGTGACGCCGTTACGTACACCGA 2931
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| |||||||| | || || || |||| | || ||
Sbjct 2930 GCACGCCAAGAGGAAGACCGTCACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGG 2871
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 2870 CCGCACTCTGTACGGCTTCGGAGGTTAA 2843
>seq639
Length=213703
Score = 163 bits (180), Expect = 4e-36
Identities = 197/268 (74%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || || ||||||||||| |||||||||||||| || ||
Sbjct 43108 CGCCAAGCGCCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCGGCCAT 43167
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || ||||||||||| |||| || | |||| || ||||
Sbjct 43168 CCGCCGTCTGGCTCGCCGCGGCGGAGTCAAGCGAATCTCCGGCCTCATCTACGAGGAGAC 43227
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| |||||| | ||||| ||| ||| |||| ||| || | || |||||
Sbjct 43228 CCGCGGTGTGTTGAAGGTGTTCCTGGAGAACGTGATCCGTGACGCCGTTACGTACACCGA 43287
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| |||||||| | || || || |||| | || ||
Sbjct 43288 GCACGCCAAGAGGAAGACCGTCACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGG 43347
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 43348 CCGCACTCTGTACGGCTTCGGAGGTTAA 43375
>seq342
Length=685491
Score = 147 bits (162), Expect = 3e-31
Identities = 174/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 16464 ACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGC 16523
||||||| |||||||||||||| || ||||| ||||||||||| || || ||||||||||
Sbjct 1 ACATCCAGGGAATCACCAAGCCCGCGATCCGCCGTCTGGCTCGCCGCGGGGGAGTCAAGC 60
Query 16524 GTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCG 16583
|| | || || | |||| || |||| || | ||| | ||| ||||||| ||| ||
Sbjct 61 GTATTTCCGGTCTCATCTACGAGGAGACCCGCGGTGTGCTCAAGGTCTTCCTGGAGAACG 120
Query 16584 TTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGG 16643
| |||| ||| || || ||| ||||||||||| || | ||||| |||||| ||||||
Sbjct 121 TCATCCGTGACGCCGTCACCTACACCGAGCACGCCAAGAGGAAGACCGTCACCGCCATGG 180
Query 16644 ATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || | || | || ||||| | | || || || ||| |||||
Sbjct 181 ACGTGGTGTACGCTCTCAAGAGGCAGGGCCGCACTCTGTACGGCTTCGGAGGTTAA 236
>seq372
Length=566801
Score = 136 bits (150), Expect = 6e-28
Identities = 176/243 (72%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || || ||||||||||| || ||||||||||| || ||
Sbjct 455119 CGCCAAGCGGCACCGTAAAGTCCTCCGCGATAACATCCAGGGCATCACCAAGCCCGCCAT 455060
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| || || |||||||||||| |||| || || |||| || ||||
Sbjct 455059 CCGCCGCCTGGCTCGCCGCGGCGGAGTCAAGCGTATCTCCGGCCTGATCTACGAGGAGAC 455000
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| | ||||| ||| ||| |||| ||| || | || || ||
Sbjct 454999 CCGCGGCGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGTGACGCCGTGACGTACACGGA 454940
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| ||||||| | || || || |||| | || ||
Sbjct 454939 GCACGCCAAGAGGAAGACGGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGGCAGGG 454880
Query 16672 CCG 16674
|||
Sbjct 454879 CCG 454877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071556486605
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