Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq292 107 2e-18
>seq292
Length=796020
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 115277 AGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG 115336
|| ||||| ||||| ||||| || ||||| ||||| || || ||||||||| | || |
Sbjct 171230 AGTTTAAAGATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTG 171289
Query 115337 GAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCC 115396
||| |||| ||||| ||| | || || ||| ||| |||||||||||| | ||
Sbjct 171290 GAGCCCAGTGACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCT 171349
Query 115397 GTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCC 115456
||| ||||| || || || | ||| || ||||| | ||||||| | ||| || |
Sbjct 171350 CCTGACCAGCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCG 171409
Query 115457 GATTATAACATTCAAAAAGAGTCTACTATACATATGGTG 115495
|| || ||||| || || ||||| || | || |||||
Sbjct 171410 GACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTG 171448
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||| || ||||| ||||| || || ||||| ||| | || |||| ||||
Sbjct 171467 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAGT 171526
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| || ||| | || || ||| ||| |||||||||||| | || ||| |||
Sbjct 171527 GATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAG 171586
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| ||||| || | ||| |||||||| | ||||||| | ||| || | || || |||
Sbjct 171587 CAGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAAC 171646
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGA 115513
|| || || ||||| || | || ||||| | | || | ||||||
Sbjct 171647 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGAGGA 171694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425323342238200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |