Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq32 104 5e-17
seq302 93.3 9e-14
seq191 93.3 9e-14
seq39 93.3 9e-14
seq8 93.3 9e-14
seq339 91.5 3e-13
seq234 91.5 3e-13
seq150 91.5 3e-13
seq10 91.5 3e-13
seq392 89.7 1e-12
seq74 87.8 4e-12
seq46 86.0 1e-11
>seq32
Length=3524602
Score = 104 bits (114), Expect = 5e-17
Identities = 589/927 (64%), Gaps = 30/927 (3%)
Strand=Plus/Minus
Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586
||||| | ||| ||||| ||| | || || ||||| | || | |||||| ||||
Sbjct 2635466 TACTGGAGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCT 2635407
Query 293587 TCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGG 293646
| | ||| ||||| ||||| | || || ||| ||| ||||||||||| |
Sbjct 2635406 GCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATG 2635347
Query 293647 TTGAGCTTGCGAGCCTGCTCAGAG---TCAAACGGCATCTT-CAGCTGGAAGAACACATC 293702
|||||| || | || || | | || ||||| || | || | ||| ||| ||||
Sbjct 2635346 TTGAGCA-GCTGGGCT--TCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCATC 2635291
Query 293703 CTGCAGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTC 293762
||||||||| || || | || | || | | ||||||||| |||||| || ||
Sbjct 2635290 GGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTC 2635231
Query 293763 GGGAACCGCATATGCCATCACATCAATGCTCCTGTCCAGGTTCTTCGTGAGAACCTTGAC 293822
||| |||| || | | || ||| || ||| ||||| ||| || ||||||
Sbjct 2635230 GGGGACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGG- 2635172
Query 293823 ATGCTTGCGG--AGGTCCTCAAAGTCAAATGCA---TCATTCTTGACATAGTTCTTGAGC 293877
|| | || || | || ||||| || | || | |||| || | |||||
Sbjct 2635171 -TGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCTGGCGTGACGTACATGTTGAGG 2635113
Query 293878 ACGATGCTACCGATGACACACACTGCAGTCTCCTCCTTCGAGGTGTACTCGACAATCTCA 293937
||||| | | | || || || ||| ||||| ||||||||| || | |||
Sbjct 2635112 GCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCT 2635053
Query 293938 GCACAGAGGTTACTGCCCTTGATGGTGCCCGCATTAGACTGCATGTTCTTGGCATTGACA 293997
| |||||||| |||| |||||||||||| || ||| || |||| ||| |
Sbjct 2635052 GTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAA 2634993
Query 293998 CTGTCTTTGTTGAGGACATATGGCATACCCGTTTCAATCTGAGTGGTGACCATGGTGTTC 294057
||| |||| ||| | || ||| | || ||||| |||| | || |||| || |
Sbjct 2634992 GCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTAC 2634933
Query 294058 CAGACATCGCGAGCCTTCACCACGCGCTTTGCCTTCCCCTCAGACTCATACTTGGTGTAA 294117
|||| | | ||||||||||| | ||| || |||| || |||||| |||||||
Sbjct 2634932 CAGAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAG 2634873
Query 294118 AGCTCTTCGTATTCCTTGCCATATACATCAGACAGGCCAGGGCACTCGTGAGGGTCA-AG 294176
|||| ||| | |||| || | || ||| || || |||||| ||| || |
Sbjct 2634872 AGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCG-CTGGGACACAT 2634814
Query 294177 TAGAGACCA---CTGGGCATCAGTCTCCACGCGCTTCATGAATAGATCATTGACCCACAT 294233
| ||||| |||| | ||||||| | ||||||||| || || || |||||
Sbjct 2634813 CAAGGACCAGTCCTGG---TTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAA 2634757
Query 294234 TGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT-TGAT-TACGACGGAGGAGC 294291
||||| || | || | ||| | | | ||||| ||| || | | | | || |
Sbjct 2634756 GGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTC--AGCTCC 2634699
Query 294292 AGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACAGCAAAGGACCC---CTTC 294348
|||||||| | | |||| || |||||||| |||| || |||| ||| ||
Sbjct 2634698 AGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTC 2634639
Query 294349 CTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAACACCTTCAGCATAGGCACG 294408
|| || ||||||| | ||||| || ||| ||| | || ||||||| || ||
Sbjct 2634638 TTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACC 2634579
Query 294409 ATGCCATCGGACTCACCATTGGTTCCG 294435
| || | ||| | || ||||| |||
Sbjct 2634578 AATCCGTTGGAGTTGCCGTTGGTGCCG 2634552
>seq302
Length=968941
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 230040 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 229981
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 229980 GCCCCACGTTGGGC 229967
>seq191
Length=1256563
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 839565 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 839506
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 839505 GCCCCACGTTGGGC 839492
>seq39
Length=3324142
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 436445 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 436386
Query 142563 CCCCACATCGGGCAGA 142578
|||||| | |||| ||
Sbjct 436385 CCCCACGTTGGGCGGA 436370
>seq8
Length=5572511
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 2707859 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2707800
Query 142563 CCCCACATCGGGCAGAAGT 142581
|||||| | |||| ||||
Sbjct 2707799 CCCCACGTTGGGCGCAAGT 2707781
>seq339
Length=691795
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 95343 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 95284
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 95283 CCCCACGTTGGGC 95271
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 104091 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 104032
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 104031 CCCCACGTTGGGC 104019
>seq234
Length=1038444
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 66425 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 66366
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 66365 CCCCACGTTGGGC 66353
>seq150
Length=1588068
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 991299 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 991240
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 991239 CCCCACGTTGGGC 991227
>seq10
Length=5440583
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1891528 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1891469
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1891468 CCCCACGTTGGGC 1891456
>seq392
Length=529284
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 132880 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 132939
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 132940 CCCACGTTGGGC 132951
>seq74
Length=2468174
Score = 87.8 bits (96), Expect = 4e-12
Identities = 67/77 (87%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 142048 CGCATGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106
|||| ||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||
Sbjct 352519 CGCA-GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGT 352577
Query 142107 TCGACCCCCGCCAGAGA 142123
|||| |||| ||||||
Sbjct 352578 TCGAGTCCCGGCAGAGA 352594
>seq46
Length=2996542
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 1830791 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 1830732
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 1830731 TCCCGGCAGAGA 1830720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027784320901385
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |