Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq32 672 0.0
seq146 113 9e-20
seq169 105 1e-17
seq22 100 5e-16
>seq32
Length=3524602
Score = 672 bits (744), Expect = 0.0
Identities = 1118/1597 (70%), Gaps = 50/1597 (3%)
Strand=Plus/Minus
Query 244010 GAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCC 244069
|| || |||| |||| |||| | | ||| | |||||||||||||| |||||||
Sbjct 2635757 GATCCGTTGTTTGCGATCAGCTTGTTCTTCATCTCCTCGTTCCACAGGCC---GCGCTCC 2635701
Query 244070 ---AGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGC 244126
|| ||| || ||||| ||| || | ||| |||||||| |||||||| | |||
Sbjct 2635700 GTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGG 2635641
Query 244127 TGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTG 244186
||||| ||||||| || || ||||||| ||| |||||||||| ||||| || |||
Sbjct 2635640 GTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTG 2635581
Query 244187 CTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGG 244246
||| || |||||||||| || |||||| ||||||||||||||||| | |||
Sbjct 2635580 GACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTC 2635521
Query 244247 AGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATG 244306
| ||| ||||||||||||| | | |||| || || ||||||||
Sbjct 2635520 TCCTTCAGCAGCTTCCAGTCCCACAGGTC-----GGTCGGCGTCTTCT----CCCACATG 2635470
Query 244307 TCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCG 244366
|| |||| || | ||||| |||||||| ||||||||| ||| |||||| ||| |
Sbjct 2635469 TCGTACTGGAGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGA-G 2635411
Query 244367 CGCTG-GGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCAT 244425
| ||| ||| || | ||||| | || |||||||||| |||||||||||||||||||
Sbjct 2635410 CTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTG 2635351
Query 244426 CTTGTTCATGTCGCGGGCCTT-GCCGCAGGTGAAGGGGATGCC-CATCATCATGAAGACG 244483
|||| | | || || ||| | || ||| || ||| | ||||| |||||| |
Sbjct 2635350 GATGTTGA-GCAGCTGGGCTTCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCA 2635293
Query 244484 TCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCT 244543
|||||||| ||||| |||||||| ||||| || ||||| ||||||||||| | ||||
Sbjct 2635292 TCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCT 2635233
Query 244544 TCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGG 244603
||||| || ||||| | ||| |||||| | |||||||||||| ||| | |
Sbjct 2635232 TCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTG 2635173
Query 244604 ACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC 244663
|||| ||||||| || |||||| | || || || ||| | |
Sbjct 2635172 GTGACGGAGGCCAGCTTCTTGAAGTCGAA-----AG------TCCGCTCTGGCG----TG 2635128
Query 244664 ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTG 244723
|| || ||||||||||| | |||||||||||||||||||||||| ||| | |||||
Sbjct 2635127 ACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTG 2635068
Query 244724 TACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTG 244783
|||| || | ||| ||||||||||| ||||| |||||||||||||||| ||| || |||
Sbjct 2635067 TACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTG 2635008
Query 244784 GACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCG 244843
||| |||||| |||||||||||||||||| ||||| |||||| ||| |||||
Sbjct 2635007 CTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGAC 2634948
Query 244844 ACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCC 244903
||| || | || |||||| | | ||||| ||| ||| || | || || |
Sbjct 2634947 TCGATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTC 2634888
Query 244904 TCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCAC 244963
|| || | |||||| || ||||||||| |||||| |||||| || ||||| |||
Sbjct 2634887 TCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACAC 2634828
Query 244964 GACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTC 245022
||| ||| ||||| | ||| || | | || || |||| |||||| |||||
Sbjct 2634827 -TCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGGTC 2634769
Query 245023 GGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTT 245082
|||||||| | ||| | ||| ||||| |||| |||||||| ||| || ||||||||
Sbjct 2634768 CGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCTT 2634709
Query 245083 CCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGC 245142
| ||||||||| ||||| || ||||||| |||||| || |||| ||| | |||| |||
Sbjct 2634708 CTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGC 2634649
Query 245143 GCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGC 245198
||||| | ||||||||| |||||||| | | | ||||| |||| | | |
Sbjct 2634648 CCCGGGTCTCTTGTTGCCGCCCTGGTCGA----CGTAGCGAGCCGTGTTGTTGTAAACTC 2634593
Query 245199 GCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGC 245258
||| | || || | ||||| |||| |||||||||||| |||||| ||| |
Sbjct 2634592 TCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCCCGTCG 2634533
Query 245259 CCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGC 245318
| || | ||| | | || ||| | || || ||| |||||| ||||| |||||
Sbjct 2634532 ATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACT 2634473
Query 245319 TCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGG 245378
||| | |||||| ||||| || |||||||| ||||||| ||||||| ||||||
Sbjct 2634472 GCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGC 2634413
Query 245379 AGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGT 245438
||||||||| ||| | | | | | |||||| || || || ||||||||| ||
Sbjct 2634412 TGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACC 2634353
Query 245439 AGCGGCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCG-CCGTGGAT 245496
| | || ||| |||| ||| |||| || |||||| ||| | ||| ||||||||
Sbjct 2634352 A-CTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCAATG-TCTCGCCCGTGGAT 2634295
Query 245497 CTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCTT 245556
| | | ||||||||| ||||||| ||| |||| | | || |||
Sbjct 2634294 CCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATCTT 2634235
Query 245557 GAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAG 245593
|||| |||||||||||| || |||||||| || |||
Sbjct 2634234 CAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAG 2634198
>seq146
Length=1599760
Score = 113 bits (124), Expect = 9e-20
Identities = 132/176 (75%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 244705 CACCTCCTC-CGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGG 244763
|||||| || | | ||| |||| | ||| ||||| |||||||| || ||| |||||||||
Sbjct 271714 CACCTCATCTCTACTTG-TGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGG 271772
Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823
||||||| | || || |||| ||| ||||||||||||||||||||||||| | |||
Sbjct 271773 TGCCCAGATTTTGCTGGTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCG 271832
Query 244824 CCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC 244879
|| ||||| ||| | ||| || | || |||||| | | |||||| |||
Sbjct 271833 TACCCGTCTCTGTCTGCGACTCGATGATGGCGTACCAGAGCTGCTGAGCCTTCACC 271888
Score = 111 bits (122), Expect = 3e-19
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTC 245067
|| ||| |||||||| || ||||| | ||| ||| ||||| |||| |||||||| ||
Sbjct 272192 CTTCATAAAGAGGTCTGGAATCCACAAGGCAAAGAACAGGTCTCTGGCTCTCTGCTCTTC 272251
Query 245068 CGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCAT 245127
|| ||||||||| ||||||||||||| ||||| ||||| | ||||| |||||||
Sbjct 272252 TTTACCCGTGTTCTTCTTCAGCTCCAAAAACTCAAACACGTCAGCATGCCACGGCTCCAG 272311
Query 245128 GTAGACAGCGAGGGCGCCGGG 245148
||| |||| || ||| || ||
Sbjct 272312 GTACACAGAGAAGGCCCCTGG 272332
Score = 91.5 bits (100), Expect = 3e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156
|||||||||||||| || ||||| | ||| ||| | |||||| || || ||| |||
Sbjct 270081 ACCTGAAACTCTCCTGAGAGCACCCTGCGAGTGTAAAAGTTGCTTGTGTACGCCTCAATG 270140
Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216
||| |||| ||||| ||||| || ||| || || ||||| || | | ||||||
Sbjct 270141 GACTCATTGTTACCCAGGATCTGGGCAGTGGAAGCTGTGGGCATCGGGGCTAAAAGCAGA 270200
Query 244217 CTGTTCCTCACGCCGTGCCT 244236
|||||||| || ||||||||
Sbjct 270201 CTGTTCCTTACACCGTGCCT 270220
>seq169
Length=1474717
Score = 105 bits (116), Expect = 1e-17
Identities = 107/137 (78%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||||| |||| ||||| | ||||| ||||| ||||||||||| || | ||||||
Sbjct 1314716 GGAGAGAGAGTGGTGGCCTTCGCTGCCGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCC 1314775
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
||||||||||||| ||| ||| ||| | |||||| || || |||||| ||||| ||
Sbjct 1314776 GCCATCTTCTGGCTGAAGAAGAGAGGCCT-GATGCCTGGCCTAACCTTCAGCAACGAGCT 1314834
Query 42815 CATCAGCAGGGACGAGG 42831
|||||| | |||||||
Sbjct 1314835 CATCAGTCGAGACGAGG 1314851
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/126 (75%), Gaps = 6/126 (5%)
Strand=Plus/Plus
Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536
|||| | | ||||||||| ||||| | || ||||||||||||||||| |||||
Sbjct 1314347 TTCACGCAGGAGGTGCAGGTGACAGAGGCCAGGTGTTTCTACGGCTTCCAGATCGCCATG 1314406
Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593
|||||| | ||||||||| |||| || ||||||| |||| |||||| |||||||
Sbjct 1314407 GAGAACATCCACTCTGAGATGTA---CAGCCTGCTCATCGACACCTACATCAAGGATCCC 1314463
Query 42594 GTCGAG 42599
||||
Sbjct 1314464 AGCGAG 1314469
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
||| |||||||| ||||||||||| || ||||||| ||||||||||| || ||||||||
Sbjct 1315631 CCCGTTCGACTTCATGGAGAACATTTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAGCG 1315690
Query 43130 CGTCGCCGACTACCAG 43145
|||| || ||||||
Sbjct 1315691 GGTCGGGGAGTACCAG 1315706
>seq22
Length=4020106
Score = 100 bits (110), Expect = 5e-16
Identities = 106/137 (77%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||| | || || || || | || || ||||| ||||||||||| ||| | |||||
Sbjct 3875833 GGGGAGCGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATCTTCTTCTCAGGCTCATTCGCT 3875892
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
| |||| |||||| ||| ||| ||| || ||||| || || |||| ||| ||||||||
Sbjct 3875893 GCTATCTACTGGCTGAAGAAGAGAGGCCTC-ATGCCAGGCCTTACCTACTCCAACGAACT 3875951
Query 42815 CATCAGCAGGGACGAGG 42831
||| |||||||||||||
Sbjct 3875952 CATTAGCAGGGACGAGG 3875968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944292160103600
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