Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq72 96.9 3e-15 >seq72 Length=2559699 Score = 96.9 bits (106), Expect = 3e-15 Identities = 117/155 (75%), Gaps = 6/155 (4%) Strand=Plus/Minus Query 20521 GTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||| |||| | || |||||||||||||| |||||||| || |||||||||| |||||| Sbjct 2420988 GTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCC 2420929 Query 20581 CTC--CCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCC 20638 ||| || ||| || | | ||| | | ||||||| || | ||| || || ||| Sbjct 2420928 CTCCTCCCTCTCTGTG--AAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATCC 2420871 Query 20639 CATATCTTGACTCCTGTTCT-TGAAAGCTCCCTGG 20672 || ||||| |||||| |||| ||| |||||| ||| Sbjct 2420870 CAGATCTTCACTCCT-TTCTCTGACAGCTCCTTGG 2420837 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || |||| || |||| ||| || || | || | |||||||| ||||| ||||| Sbjct 2421889 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 2421830 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||| ||||||||| | || | ||| ||||||||||| || ||||| ||||| Sbjct 2421829 ACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTCGCAG 2421770 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || || || ||||| | || ||||| || |||||||| Sbjct 2421769 ACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCAT 2421729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441350814117400