Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq317 86.0 5e-12 >seq317 Length=273463 Score = 86.0 bits (94), Expect = 5e-12 Identities = 71/83 (86%), Gaps = 3/83 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTG-AGTAAGATCTAAGGAAC 115587 |||||||| ||||||||||| |||| |||||||||||||| | || |||| ||||||| Sbjct 172257 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGGTAGAGCGATCAAAGGAAC 172198 Query 115588 CAAAACTGATATATTGAGCCATT 115610 || ||||||| || ||||||||| Sbjct 172197 CATAACTGATTTAATGAGCCATT 172175 Score = 86.0 bits (94), Expect = 5e-12 Identities = 71/83 (86%), Gaps = 3/83 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTG-AGTAAGATCTAAGGAAC 114390 |||||||| ||||||||||| |||| |||||||||||||| | || |||| ||||||| Sbjct 172257 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGGTAGAGCGATCAAAGGAAC 172198 Query 114391 CAAAACTGATATATTGAGCCATT 114413 || ||||||| || ||||||||| Sbjct 172197 CATAACTGATTTAATGAGCCATT 172175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397043115795970