Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq15 116 4e-21
>seq15
Length=4650977
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| |||||||| || |||||||| || | | |||||| | || || ||||||||||||
Sbjct 564149 GTAGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCG 564208
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || || || || || || || ||||| |||
Sbjct 564209 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTG 564268
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || || | || |||||||| | || | |||||||||||| | ||
Sbjct 564269 ACGTTCTCAATGGTGTCGCTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 564328
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 564329 TTGACGAAGATCTGCAT 564345
Score = 104 bits (114), Expect = 2e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||||||||| || ||||| || | | |||||| | ||||| |||||||| |||
Sbjct 564605 GTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 564664
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || || || || || || || | |||| |||||
Sbjct 564665 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGA-TTTTGGCTTT 564723
Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
|| ||| | || || | || ||||| || | || | ||| |||||||| | ||
Sbjct 564724 GACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGT 564783
Query 64426 TTTTACGAAAATTTGCATTTT 64446
|| || || || ||||| ||
Sbjct 564784 CTTGACAAAGATCTGCATGTT 564804
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| |||||||| || |||||||| || | | |||||| | ||||| |||||||||||
Sbjct 569415 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 569474
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || || || || || || || ||||| |||
Sbjct 569475 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTG 569534
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || |||| || ||| | || | || | ||| |||||||| | ||
Sbjct 569535 ACGTTCTCAATGGTGTCACTGGGCTCCCCCTCAAGGGTGATGGTTTTGCCGGTGAGGGTC 569594
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||| || |||||
Sbjct 569595 TTGCCGAAGATCTGCAT 569611
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || || |||||||| || | | |||||| | |||
Sbjct 564362 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 564421
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| |||||| | || |||| ||||||||| || || || || || || ||
Sbjct 564422 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 564481
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || ||| | || || | || || || || | || | ||||
Sbjct 564482 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTC 564541
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | || || ||||| || |||||
Sbjct 564542 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 564573
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 64262 ATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGC 64321
|||||||| || | | |||||| | ||||| ||||||||||| ||| | || |||| |
Sbjct 569202 ATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTC 569261
Query 64322 TGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGT 64380
|||||||| || || || || || || || || | |||| ||||| || ||| | ||
Sbjct 569262 TGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGA-TTTTGGCTTTGACGTTCTCAATGGT 569320
Query 64381 ATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTG 64440
|||| || || ||||| | || | |||||||| || | || || ||||| || ||
Sbjct 569321 GTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 569380
Query 64441 CAT 64443
|||
Sbjct 569381 CAT 569383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499619911443400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |