Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq32 279 5e-70 seq292 105 7e-18 seq146 86.0 6e-12 >seq32 Length=3524602 Score = 279 bits (308), Expect = 5e-70 Identities = 956/1462 (65%), Gaps = 40/1462 (3%) Strand=Plus/Minus Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134 ||||| ||| | | || | ||| ||||| ||||| || || || || |||| || || Sbjct 2635631 TTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTG 2635572 Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAAC 153194 |||||| ||||| || || |||| || |||||| || | ||||||| | Sbjct 2635571 GGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGC 2635512 Query 153195 GCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT 153254 || ||| |||||||| | | ||| ||| | ||||||||||||||| | | || Sbjct 2635511 AGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCC 2635452 Query 153255 CGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCAGTTCGCA 153313 |||| |||| ||| | | || |||| |||| || || ||| |||||||| Sbjct 2635451 TTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGA-GCTCTGCGGCGAGTTCGCA 2635393 Query 153314 GCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGC 153373 ||| ||||| || ||| | | ||| ||||| ||| ||| || | ||||| | || Sbjct 2635392 GCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGC 2635333 Query 153374 TTCTTCGCTCTCGTACGGCATG-CGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432 ||| ||| ||| |||| ||| |||| ||| | ||||| |||||||||||||||| | Sbjct 2635332 TTCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGC 2635274 Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGA 153491 ||| ||||| || | || || |||| || |||| || | | || |||| | Sbjct 2635273 CGATCCCGATCGGCCTGTGGCGCTTGTTG-GACGTCTCGGCTTCGGGGACCGGGTAGTAA 2635215 Query 153492 TTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTC 153551 ||| ||||| || ||||||||||| ||| | || || || | | || ||| Sbjct 2635214 TTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTC 2635155 Query 153552 TCGAAATCATAGGTCATTTC-GTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAG 153610 | ||| || | ||| || | || |||| ||| || | ||| || || ||||| Sbjct 2635154 TTGAAGTCGAAAGTCCGCTCTGGCGTGACGTA--CAT--GTTGAGGGCGATGGAGGCCAG 2635099 Query 153611 ATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCT 153670 || ||||||||| ||| || | | |||||| ||| | ||| | |||||||||||| Sbjct 2635098 GTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCT 2635039 Query 153671 GCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAG 153730 |||||| ||| ||||| || ||||| ||||| || | ||||| ||||| ||| |||| Sbjct 2635038 GCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAG 2634979 Query 153731 CATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCG 153789 |||||| || ||||| ||| || | |||| ||| | || || | ||||| Sbjct 2634978 CATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGAT-GGCGTACCAGAGCTGCTGCG 2634920 Query 153790 C--TC-GCACCCGCTGCCGATAGCGGCCC-TCGCTCTCGTATCGCTCGTACAGTCGCTCA 153845 | || ||||| || | | | ||| || |||| |||| ||| || ||| Sbjct 2634919 CCTTCACCACCCTCTTC----ACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCG 2634864 Query 153846 AACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACT-GATGCGGACACATCAGCGACCA 153904 ||||| || || |||| ||| | || |||||||||| | || |||||||||| ||||| Sbjct 2634863 AACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCGCTG-GGACACATCAAGGACCA 2634805 Query 153905 CATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAG 153964 | || | | || | ||||||||| ||||| | ||| | ||||| | || Sbjct 2634804 GTCCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAG 2634745 Query 153965 GTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAG 154022 ||| | || | ||| |||||| || |||| ||||| | || | | | Sbjct 2634744 GTCTCTGGCTCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAAC 2634687 Query 154023 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCCGCCC 154079 | |||| |||||| ||||| | ||| | ||| | ||| || | | || |||||| Sbjct 2634686 ACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCC 2634627 Query 154080 TGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCG 154139 || ||||||| ||| || | |||||| | || | || ||| || ||| ||| | | | Sbjct 2634626 TGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAG 2634567 Query 154140 GTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195 |||||||||| || ||| | ||| | | || | ||| | ||| || Sbjct 2634566 TTGCCGTTGGTGCCGGCAATGTAGCTTCCCGTCGATCGGATGCAGCT----CACCGCCAC 2634511 Query 154196 GCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCC 154255 ||| || || || || |||| || ||| ||||| | ||| || ||||||||| Sbjct 2634510 GCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCC 2634451 Query 154256 GTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGT 154315 |||||||| ||||| | | ||||| ||| || ||| ||||| | || Sbjct 2634450 TTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGT 2634391 Query 154316 TCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTA 154375 || || |||||||| ||| ||||| || ||| || | || | | ||| Sbjct 2634390 CCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTA 2634331 Query 154376 CGTTTCGATGGCGTCTTCGATATCATCG-CCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 || |||||||| | || || || ||| ||||| || || | || || | |||||||| Sbjct 2634330 GGTCTCGATGGCAGCGTCAATGTC-TCGCCCGTGGATCCCAACCGACACCCTCATGAGCA 2634272 Query 154435 TGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGG 154494 |||||||||| || ||||| ||| | || ||||||| || || || || | Sbjct 2634271 TGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAG 2634212 Query 154495 TTTTGTAACCGAAATACTTGTA 154516 | ||| ||||||| | ||||| Sbjct 2634211 TCTTGAAACCGAAGAAGTTGTA 2634190 >seq292 Length=796020 Score = 105 bits (116), Expect = 7e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || || || || |||||||| | | Sbjct 171432 GACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 171373 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 ||||||| | ||| ||||| ||||| || |||||||| || ||| | |||| || | Sbjct 171372 AAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC-TGAATCTTTGCCTTCAC 171314 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | | ||||||||| | || | || || ||||| |||||||| Sbjct 171313 GTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTCCCAGTGAGAGTTTT 171254 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 171253 CACGAAAATCTGCAT 171239 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || || || || ||||| || | | Sbjct 171660 GACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCA 171601 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| ||||| || |||||||| || ||| | |||| || | Sbjct 171600 AAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC-TGAATCTTTGCCTTCAC 171542 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||| || | | ||||||||| | || | || || ||||| || ||||| Sbjct 171541 GTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTT 171482 Query 138600 TACAAAAATCTGCATGGCT 138618 || |||||||||||| || Sbjct 171481 CACGAAAATCTGCATGCCT 171463 >seq146 Length=1599760 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||| | |||||||| | |||||| |||||| | || ||| ||||| ||||||||| | Sbjct 271731 TGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGT 271790 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 || | || | ||||| ||||| ||| ||||||||||||| Sbjct 271791 TGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGG 271830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496237679929200