Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq32 197 1e-45
seq15 109 5e-19
seq146 95.1 1e-14
seq292 87.8 2e-12
>seq32
Length=3524602
Score = 197 bits (218), Expect = 1e-45
Identities = 516/772 (67%), Gaps = 20/772 (3%)
Strand=Plus/Minus
Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA 146103
||| |||||| ||| | ||||||| | ||| ||||| |||| || || | |
Sbjct 2635697 AGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTG 2635638
Query 146104 TACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTA 146163
|| | |||||||||| ||| ||||| ||||||||||| || || ||||| || || |
Sbjct 2635637 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 2635578
Query 146164 GCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCC 146223
|| || |||||| ||||| ||||| ||| |||||||||||| | ||||| |||
Sbjct 2635577 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 2635518
Query 146224 C---GTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAA 146280
| || || ||| | ||||| | || || || | | | |||||||
Sbjct 2635517 TTCAGCAGCTT---CCAGTCCCACA---GGTCGGTCGGCGTCTTCTCCCACATGTCGTAC 2635464
Query 146281 TGCATAGTGCCGCGGAACAGGGGGCTATTC-TCGTACGATTCATAAGGACCGTCGATCTT 146339
|| | |||| | | |||| | | ||||| | || || || ||| | |||
Sbjct 2635463 TGGAGGATGCC-CTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGA-GCTCTG 2635406
Query 146340 -GGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGT 146398
||| ||||||||||| || ||||| || | ||| |||||||| |||| | ||
Sbjct 2635405 CGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGT 2635346
Query 146399 TGACGCTCCTGGCCTCCTCG-CTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGC 146456
||| || |||| || | | || ||| | || || ||| | || | ||||| |||||
Sbjct 2635345 TGA-GCAGCTGGGCTTCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCATCGGC 2635288
Query 146457 GAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGC 146516
|||||||| | |||| || | || | ||| |||||| || | || | |
Sbjct 2635287 CAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGG 2635228
Query 146517 AGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAA 146576
|| |||| ||| ||||||||||||||||||| || ||||| | || || |
Sbjct 2635227 GACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGAC 2635168
Query 146577 ACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGC 146636
|||| |||| || || | | | ||| |||| || |||||| |||
Sbjct 2635167 GGAGGCCAGCTTCTTGAAGTCGAAAGTCC--GCTCTGGCGT-GACGTACATGTTGAGGGC 2635111
Query 146637 GATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGC 146696
||| ||||||| ||| || ||||| |||||||||| | |||| ||| | ||| |
Sbjct 2635110 GATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGT 2635051
Query 146697 GCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGG 146756
||||||||||||||| |||||| |||||| || | ||||| || | ||||||| |
Sbjct 2635050 GCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGC 2634991
Query 146757 GTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATG 146808
|||||||||||||||||| || |||||||||| | || ||||| ||||
Sbjct 2634990 GTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATG 2634939
>seq15
Length=4650977
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || |||||||| |||||||| || || ||||| ||| || ||||| |||||
Sbjct 564605 GTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 564664
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| |||||| |||
Sbjct 564665 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCTTTG 564724
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | ||||||||||| || ||
Sbjct 564725 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTC 564784
Query 127097 TTTACAAAAATCTGCATG 127114
|| ||||| |||||||||
Sbjct 564785 TTGACAAAGATCTGCATG 564802
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
||||| ||||| || || ||||| ||| || ||||| ||| || ||||| || ||
Sbjct 564149 GTAGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCG 564208
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| |||||| ||||
Sbjct 564209 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTG 564268
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | || ||||| | ||| | || |||||||| || ||
Sbjct 564269 ACGTTCTCAATGGTGTCGCTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 564328
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || |||||||||
Sbjct 564329 TTGACGAAGATCTGCATG 564346
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || ||||| || || ||||| || || ||||| ||| || ||||| |||||
Sbjct 569643 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 569702
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| ||| || |||
Sbjct 569703 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTA 569762
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | ||||||||||| || |||
Sbjct 569763 ACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTGCCGGTGAGGGTT 569822
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 569823 TTCACAAAGATCTGCAT 569839
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || || ||||| ||| || ||||| |||||
Sbjct 564377 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 564436
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| ||| || ||||
Sbjct 564437 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTG 564496
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | || |||||||| || ||
Sbjct 564497 ACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 564556
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || |||||||||
Sbjct 564557 TTGACGAAGATCTGCATG 564574
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || ||||| || || ||||| || || ||||| ||| || ||||| || |||
Sbjct 569415 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 569474
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| |||||| ||||
Sbjct 569475 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTG 569534
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| | || | ||| | ||||||||||| || ||
Sbjct 569535 ACGTTCTCAATGGTGTCACTGGGCTCCCCCTCAAGGGTGATGGTTTTGCCGGTGAGGGTC 569594
Query 127097 TTTACAAAAATCTGCATG 127114
|| | || |||||||||
Sbjct 569595 TTGCCGAAGATCTGCATG 569612
Score = 82.4 bits (90), Expect = 7e-11
Identities = 128/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 126932 ATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGC 126991
|| ||||| || || ||||| ||| || ||||| || ||||| |||||| | |
Sbjct 569202 ATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTC 569261
Query 126992 TGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTG 127051
||||| || || || ||||||||||| ||| |||||| |||| | || | ||||
Sbjct 569262 TGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCTTTGACGTTCTCAATGGTG 569321
Query 127052 TCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 127111
|| | ||| ||||| | ||| | || ||||| || || || || || || ||||||
Sbjct 569322 TCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGC 569381
Query 127112 ATG 127114
|||
Sbjct 569382 ATG 569384
>seq146
Length=1599760
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 146686 ACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAAC 146745
|| ||||| | |||||| |||||| |||||||| |||||| ||||| ||||| | |
Sbjct 271739 ACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGTTGGTCTTC 271798
Query 146746 TTGTTGCAGGGGTCCTTGTAGAGCATGTACGG 146777
||||||||| |||||||||||||||||||||
Sbjct 271799 CTGTTGCAGGCGTCCTTGTAGAGCATGTACGG 271830
>seq292
Length=796020
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||||| || | || ||||| || || || ||||| || || ||||| ||| ||
Sbjct 171676 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 171617
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
|||||||| ||||| |||||| || |||||| || ||||| ||||| || || ||| |
Sbjct 171616 CAGCTGTTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC-T 171558
Query 127024 GATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|| | | ||| || | | || | ||| || | ||| || || | ||| | || |
Sbjct 171557 GAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCT 171498
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
| || || || ||||| || |||||||||||| ||
Sbjct 171497 TCCCAGTGAGGGTTTTCACGAAAATCTGCATGCCT 171463
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||||| || | || ||||| || || || ||||| || || ||||| ||| ||
Sbjct 171448 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 171389
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
|||||||| ||||| |||| | | |||||| || ||||| ||||| || || ||| |
Sbjct 171388 CAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC-T 171330
Query 127024 GATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|| | | ||| || | | || | |||||| | ||| || || | ||| | || |
Sbjct 171329 GAATCTTTGCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCT 171270
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || || |||||||| || |||||||||||
Sbjct 171269 TCCCAGTGAGAGTTTTCACGAAAATCTGCAT 171239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475477114116400
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