Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq32 187 2e-42
seq146 95.1 1e-14
seq15 87.8 2e-12
seq292 82.4 7e-11
>seq32
Length=3524602
Score = 187 bits (206), Expect = 2e-42
Identities = 892/1400 (64%), Gaps = 36/1400 (3%)
Strand=Plus/Plus
Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957
|| || ||||| || || || ||||||||| | || | | || | ||||| ||
Sbjct 2634247 AAAGTGGCCGAGCGGCCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGA 2634306
Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
||||| || || | ||| || ||| | | |||| | || | ||||| |||||
Sbjct 2634307 GACATTGACGCTGCCATCGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACGCC 2634366
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077
||| || | ||| |||||| || || ||| ||| |||| || || |||||
Sbjct 2634367 TCTCCGACCCTCTTCAACGCCGGGACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTC 2634426
Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137
||| || || ||||||||| || ||||| || || || | |||||| | |||
Sbjct 2634427 ACCATGAAGGACGACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATT 2634486
Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAG-GCCGCGGAAGCCG 123196
||||| | | || || || |||||| ||| | | | || | || ||||||
Sbjct 2634487 TCCAAGTCCGCTGGGGGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACG-GGAAGCTA 2634545
Query 123197 CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAA 123256
||| ||||| |||| | | || ||| | | | |||||| |||||||||| ||
Sbjct 2634546 CATTGCCGGCACCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAA 2634605
Query 123257 CGCCGTGCGGCACGTCGACCAGGGCGGCAAACGCAAA---GGCGCGATGGCGATCTATCT 123313
| | | || ||||||||||||||||||| | | || || | || || || ||
Sbjct 2634606 CACGGCTCGCTACGTCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCT 2634665
Query 123314 AGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGA 123373
|||||||||||| | || |||| ||| || | | | || |||| || |||
Sbjct 2634666 GGAACCGTGGCACTTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGA 2634725
Query 123374 AGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACG 123433
|| ||| |||| | || | || ||||| || ||| | || || |||| ||| |
Sbjct 2634726 GGAGCAGAGAGCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAGAG 2634785
Query 123434 CGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCG-GTGTCCCGGCTTGAGCG 123492
|| | | || | ||||| | ||||||||| | || ||||||||| || ||
Sbjct 2634786 AGTGGAGAGCAACCAGGACTGGTCCTTGATGTGTCCC-AGCGAGTGTCCCGGGCTGGACG 2634844
Query 123493 ACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCA-----A 123547
| | || | |||| || || | ||| | ||| ||| ||||| | |
Sbjct 2634845 AGTGCTGGGGAGAGGAGTTCGAGAAGCTCTACACCAGATATGAGAAGGAAGGGAGGGTGA 2634904
Query 123548 ACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGA 123607
| ||| | || | | | ||| | | || | | || ||||| | || |||
Sbjct 2634905 AGAGGGTGGTGAAGGCGCAGCA---GCTCTGGT--ACGCCATCATCGAGTCCCAGACCGA 2634959
Query 123608 AACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAA 123667
|||||| ||||| |||||||||||||| ||||| ||||||||||| | ||| ||| ||
Sbjct 2634960 AACCGGGACGCCCTACATGCTCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAA 2635019
Query 123668 CTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACA---GCGATGC 123724
| |||| || || ||||| || || || ||| | || | | || |||| || | |
Sbjct 2635020 CCTGGGCACCATCAAATGCAGCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGGA 2635079
Query 123725 CGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCG----AAA 123780
||| |||||||| || || |||| || || | | || | |||| | |
Sbjct 2635080 CGAG---GTGGCCGTCTGCAACCTGGCCTCCATCGCCCTCAACATGTACGTCACGCCAGA 2635136
Query 123781 ACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGA 123840
||| |||| | ||| | | ||| | | || || | || || || | |
Sbjct 2635137 GCGGA-CTTTCGACTTCAAGAAGCTGGCCTCCGTCACCAAGGTAATCGTGAAAAACCTCA 2635195
Query 123841 ACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAAC 123900
|||| || ||||| | |||| || || | ||||| ||| || | |
Sbjct 2635196 ACAAGATCATCGACATCAATTACTACCCGGTCCCCGAAGCCGAGACGTCCAACAAGCGCC 2635255
Query 123901 ACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCG-CATG 123959
|||| ||| |||| | ||| | || || ||||||| || || | || |||| |||
Sbjct 2635256 ACAGGCCGATCGGGATCGGCGTCCAGGGTCTGGCCGATGCCTTCATCCTGATGCGACAT- 2635314
Query 123960 CCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTAC 124019
|||| ||||||| |||||| || |||| || | || || ||| || || || ||
Sbjct 2635315 CCGTTCGAAAGCCCCGAAGCCCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACCAC 2635374
Query 124020 GGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCG 124079
| ||| ||||||| ||||||||||| || | | |||| | ||||| | |||| |
Sbjct 2635375 GCCGCCCTGGAGGCCAGCTGCGAACTCGCCGCAGAGCTCGGCCCCTACGAGACATACGAG 2635434
Query 124080 GGC-AGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAA 124138
||| ||||| | || || || | ||||||||||||||| | || ||||| |
Sbjct 2635435 GGCTCGCCCGTC-AGTAAGGGCATCCTCCAGTACGACATGTGGGAGAAGACGCCGACCGA 2635493
Query 124139 TTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCG--ACGCACGGTTTGCGTAACTCG 124196
|||||||||||| | | || | | | |||| | ||||| || | |||
Sbjct 2635494 CCTGTGGGACTGGAAGCTGCTGAAGGA--GAAGATCGCCAAACACGGCGTGAGGAACAGC 2635551
Query 124197 CTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCC 124256
||| || ||||| |||||| ||||| |||| || || || | || |||||||| |||
Sbjct 2635552 CTGCTGCTGGCGCCCATGCCCACGGCGTCCACCGCCCAGATCCTGGGCAACAACGAGTCC 2635611
Query 124257 TTCGAGCCGTTCACTAACAA 124276
||||| ||| ||| | |||
Sbjct 2635612 ATCGAGGCGTACACCAGCAA 2635631
>seq146
Length=1599760
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665
|| || || |||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct 271842 GAGACGGGTACGCCGTACATGCTCTACAAGGACGCCTGCAACAGGAAGACCAACCAGCAA 271783
Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACA 123717
|| |||| || || || | || ||||| ||| | || || |||||||||
Sbjct 271782 AATCTGGGCACCATCAAGTCCAGCAATCTCTGCACAGAGATCGTCGAATACA 271731
>seq15
Length=4650977
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || || ||||| ||||||||||| || || | ||| ||| |||
Sbjct 564593 ACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 564652
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || ||||| || | |||| | |||||||| || || ||||| || ||||| ||
Sbjct 564653 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 564712
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
||||| ||||| || | || | ||||||| | ||| || || || || | |||||
Sbjct 564713 ATTTTGGCTTTGA-CGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTT 564771
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| || || || ||||| || |||||
Sbjct 564772 GCCGGTGAGGGTCTTGACAAAGATCTGCAT 564801
>seq292
Length=796020
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/212 (69%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| || || || || || ||||| ||||| || || || | ||| ||| ||
Sbjct 171448 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 171389
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|| ||||| || || | || | | |||||||| || ||||||||||||||||| ||
Sbjct 171388 CAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTG 171329
Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
||| ||| || | || | || | |||||| | ||| || || || |||| || |
Sbjct 171328 AATCTTTGCCTTCA-CGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCT 171270
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || || |||||||| || ||||| ||||||
Sbjct 171269 TCCCAGTGAGAGTTTTCACGAAAATCTGCATC 171238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451980684590600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |