Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq32 161 1e-34 seq22 100 3e-16 >seq32 Length=3524602 Score = 161 bits (178), Expect = 1e-34 Identities = 885/1389 (64%), Gaps = 40/1389 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 ||||||||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| ||||| Sbjct 2635637 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 2635578 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || ||||||||||| |||| || |||||||| | | || || ||| Sbjct 2635577 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 2635518 Query 116023 TTGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGG 116079 || || | |||||| | || | | |||| | |||||||| || ||||| Sbjct 2635517 TTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTC---TCCCACATGTCGTACTGG 2635461 Query 116080 AGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137 ||||| || | |||| ||||| ||||| ||||||| || ||||| | | | Sbjct 2635460 AGGATGCCCTTACTGACG--GGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCGG 2635403 Query 116138 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 116197 | | |||| |||| ||||| ||||| ||||| || || ||||| || || | || | Sbjct 2635402 CGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGA 2635343 Query 116198 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGAC 116257 || ||| ||| | || |||| | || || || || |||| || |||| Sbjct 2635342 GCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGAC 2635283 Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACG 116316 | ||||| |||| || || || | || | | | || ||| | ||| || || Sbjct 2635282 CCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCG-GCTTCGGGGACC 2635224 Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376 || || |||| | ||||| | | | || || ||||| || ||||| |||| Sbjct 2635223 GGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAG 2635164 Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436 ||||| | | | || ||| | || |||| |||| ||| | |||||||| Sbjct 2635163 GCCAGCTTCTTGAAGTCGAAAGTCCG---CTCTGGCGTGACGTACATGTTGAGGGCGATG 2635107 Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496 || ||||| || || || | ||| ||||| |||||||| | | || || || Sbjct 2635106 GAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAG 2635047 Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556 | || | || |||||||||| ||||| || || ||| |||| || || ||| Sbjct 2635046 AGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCC 2634987 Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACA 116616 ||||||||||| || |||||||| || || || ||||||| || || || | ||| | Sbjct 2634986 TTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGC 2634927 Query 116617 T-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGC 116675 | | ||| || || | || | | ||| |||| ||| || | |||||||| Sbjct 2634926 TGCTGCGCCTTCACCACCCTC-TTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTT 2634868 Query 116676 CTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734 ||| ||||| || ||| |||| ||| ||||| || || ||||| | | | Sbjct 2634867 CTCGAACTCCTCTCCC-CAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATCAAGG 2634809 Query 116735 ACCATTGACCACCCTCCTCA--ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792 |||| | || | ||| || | ||||||||| ||||| |||||||| | || | Sbjct 2634808 ACCAGT--CCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTA 2634751 Query 116793 GAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851 ||| || || | | | ||| || | | || || || || ||||| |||| Sbjct 2634750 GAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGAAGT 2634692 Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTGCGACGA 116907 | | | || |||||||||||||||||||| |||| | ||| || | | Sbjct 2634691 CGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTG- 2634633 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967 || |||||| || || | ||||| ||| | || | ||||| || | | || Sbjct 2634632 CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCG 2634573 Query 116968 TCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGC--TCTGACATCGTGGATGT 117025 | || | ||| || || || ||| || ||| | | || || | | Sbjct 2634572 TTGGAGTTGCCGTTGGTGCCGGCAATGT-AG-CTTCCCGTCGATCGGATGCAGCTCACCG 2634515 Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085 || || || ||||| || |||| || || | ||||||| | | || || |||||| Sbjct 2634514 CCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGA 2634455 Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145 | || ||||| ||| |||| | | || ||||||||||| |||| || |||| | Sbjct 2634454 TGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCC--G 2634397 Query 117146 GT--GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCT 117202 || || || |||||||||||||| || | |||||| ||||| || | | |||| Sbjct 2634396 GTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGGA 2634338 Query 117203 TATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCA 117262 | ||||||||| | | ||| | ||||||| |||||| || || | || |||| || Sbjct 2634337 GGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCA 2634278 Query 117263 TAAACATGT 117271 | | ||||| Sbjct 2634277 TGAGCATGT 2634269 >seq22 Length=4020106 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| | | |||||||| || ||| || || ||||||||||| || | ||||| Sbjct 3875968 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 3875909 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 ||| |||| | || ||| |||||||| |||||||||||||||||||| ||||| | Sbjct 3875908 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 3875849 Query 127659 CAAATAGACGCTC 127671 | | |||||||| Sbjct 3875848 CCACAAGACGCTC 3875836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613476639672600