Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq32 161 1e-34
seq22 100 3e-16
>seq32
Length=3524602
Score = 161 bits (178), Expect = 1e-34
Identities = 885/1389 (64%), Gaps = 40/1389 (3%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| |||||
Sbjct 2635637 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 2635578
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| ||||||||||| |||| || |||||||| | | || || |||
Sbjct 2635577 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 2635518
Query 116023 TTGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGG 116079
|| || | |||||| | || | | |||| | |||||||| || |||||
Sbjct 2635517 TTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTC---TCCCACATGTCGTACTGG 2635461
Query 116080 AGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137
||||| || | |||| ||||| ||||| ||||||| || ||||| | | |
Sbjct 2635460 AGGATGCCCTTACTGACG--GGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCGG 2635403
Query 116138 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 116197
| | |||| |||| ||||| ||||| ||||| || || ||||| || || | || |
Sbjct 2635402 CGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGA 2635343
Query 116198 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGAC 116257
|| ||| ||| | || |||| | || || || || |||| || ||||
Sbjct 2635342 GCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGAC 2635283
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACG 116316
| ||||| |||| || || || | || | | | || ||| | ||| || ||
Sbjct 2635282 CCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCG-GCTTCGGGGACC 2635224
Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376
|| || |||| | ||||| | | | || || ||||| || ||||| ||||
Sbjct 2635223 GGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAG 2635164
Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436
||||| | | | || ||| | || |||| |||| ||| | ||||||||
Sbjct 2635163 GCCAGCTTCTTGAAGTCGAAAGTCCG---CTCTGGCGTGACGTACATGTTGAGGGCGATG 2635107
Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496
|| ||||| || || || | ||| ||||| |||||||| | | || || ||
Sbjct 2635106 GAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAG 2635047
Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556
| || | || |||||||||| ||||| || || ||| |||| || || |||
Sbjct 2635046 AGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCC 2634987
Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACA 116616
||||||||||| || |||||||| || || || ||||||| || || || | ||| |
Sbjct 2634986 TTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGC 2634927
Query 116617 T-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGC 116675
| | ||| || || | || | | ||| |||| ||| || | ||||||||
Sbjct 2634926 TGCTGCGCCTTCACCACCCTC-TTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTT 2634868
Query 116676 CTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734
||| ||||| || ||| |||| ||| ||||| || || ||||| | | |
Sbjct 2634867 CTCGAACTCCTCTCCC-CAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATCAAGG 2634809
Query 116735 ACCATTGACCACCCTCCTCA--ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792
|||| | || | ||| || | ||||||||| ||||| |||||||| | || |
Sbjct 2634808 ACCAGT--CCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTA 2634751
Query 116793 GAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851
||| || || | | | ||| || | | || || || || ||||| ||||
Sbjct 2634750 GAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGAAGT 2634692
Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTGCGACGA 116907
| | | || |||||||||||||||||||| |||| | ||| || | |
Sbjct 2634691 CGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTG- 2634633
Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967
|| |||||| || || | ||||| ||| | || | ||||| || | | ||
Sbjct 2634632 CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCG 2634573
Query 116968 TCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGC--TCTGACATCGTGGATGT 117025
| || | ||| || || || ||| || ||| | | || || | |
Sbjct 2634572 TTGGAGTTGCCGTTGGTGCCGGCAATGT-AG-CTTCCCGTCGATCGGATGCAGCTCACCG 2634515
Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085
|| || || ||||| || |||| || || | ||||||| | | || || ||||||
Sbjct 2634514 CCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGA 2634455
Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145
| || ||||| ||| |||| | | || ||||||||||| |||| || |||| |
Sbjct 2634454 TGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCC--G 2634397
Query 117146 GT--GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCT 117202
|| || || |||||||||||||| || | |||||| ||||| || | | ||||
Sbjct 2634396 GTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGGA 2634338
Query 117203 TATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCA 117262
| ||||||||| | | ||| | ||||||| |||||| || || | || |||| ||
Sbjct 2634337 GGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCA 2634278
Query 117263 TAAACATGT 117271
| | |||||
Sbjct 2634277 TGAGCATGT 2634269
>seq22
Length=4020106
Score = 100 bits (110), Expect = 3e-16
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598
||||||| | | |||||||| || ||| || || ||||||||||| || | |||||
Sbjct 3875968 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 3875909
Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658
||| |||| | || ||| |||||||| |||||||||||||||||||| ||||| |
Sbjct 3875908 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 3875849
Query 127659 CAAATAGACGCTC 127671
| | ||||||||
Sbjct 3875848 CCACAAGACGCTC 3875836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613476639672600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |