Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq32 192 9e-44 seq146 93.3 7e-14 >seq32 Length=3524602 Score = 192 bits (212), Expect = 9e-44 Identities = 585/891 (66%), Gaps = 26/891 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||| | ||| ||||| | ||| | ||| || | |||| | ||||||||| Sbjct 2635065 CTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCT 2635006 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||| | ||| || | ||||||||| | |||| | ||| | ||| | || |||| || || Sbjct 2635005 CTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTC 2634946 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAG 205058 | || || | ||| | | | |||| |||| |||||| | |||||| Sbjct 2634945 GATGA-TGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTCAC---CCTCCCTTCCT 2634890 Query 205059 ACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACC---GTACACGTCCATCAGCCCTG 205115 ||| ||| | ||||| ||| | | || || || | || |||||| |||| | Sbjct 2634889 TCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCA---GCCCGG 2634833 Query 205116 GACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACA 205175 |||| | |||||||||||| ||||| ||| | | | ||| |||| ||| |||| Sbjct 2634832 GACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACA 2634773 Query 205176 GGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGT 205235 |||| |||||||| | |||| || || || | ||| || | || | ||| || Sbjct 2634772 GGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGT 2634713 Query 205236 TCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCC 205294 |||| |||| ||||| ||| || | | |||| ||||||||| || | ||| ||| Sbjct 2634712 TCTTCTTCAGCTCCAG-GAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCG 2634654 Query 205295 ATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACT 205354 | || || || |||||||| || |||||||| || ||||| | | |||| ||||| Sbjct 2634653 AAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACT 2634594 Query 205355 CGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCA 205414 | ||||||||| |||| ||||||| | | ||||| |||| | ||| ||| | | Sbjct 2634593 CTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATG---TAGCTTCCC 2634537 Query 205415 GCCCTCACGTTGGAG---ATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCG 205471 | | | || || | ||| |||| ||||| |||| |||||| || | ||| Sbjct 2634536 GTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCG 2634477 Query 205472 CACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAG 205531 |||| | ||| ||| |||||||||| ||||| |||||| || || | ||| || Sbjct 2634476 CACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAG 2634417 Query 205532 CACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTG 205591 || | ||||| | |||||| || |||| |||||| || || ||||||| || Sbjct 2634416 CAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTG 2634357 Query 205592 AAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCA--GCACGCTCTCCAGATCGAAGCCGT 205649 || | |||||| || |||||||||| | ||| || || | || |||| Sbjct 2634356 AACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCA-GC-GTCAATGTCTCGCCCGT 2634299 Query 205650 GAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCA 205709 | || || | | | |||||||| | ||| || || | ||| ||| || |||| | Sbjct 2634298 GGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGA 2634239 Query 205710 CCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGG 205760 ||| ||||| |||| | ||| || || || | || |||||| ||| Sbjct 2634238 TCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTTGTAGG 2634188 Score = 181 bits (200), Expect = 2e-40 Identities = 355/516 (69%), Gaps = 13/516 (3%) Strand=Plus/Minus Query 204100 CCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCA 204158 ||||| | || ||||||| || ||||| | || || ||||||| ||||| ||| Sbjct 2635765 CCTGAATGGATCCGTTGTTTGCGATCAGCTTGTTCTTCATCTCCTCGTTCCACAGGCCGC 2635706 Query 204159 ACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCC 204218 | |||| ||| | ||||| ||||||| |||||| || |||||||||||||||| Sbjct 2635705 GCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCC 2635646 Query 204219 CTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAG 204278 |||||| | | |||| ||||| | | |||| | |||||||||||| | ||||| | Sbjct 2635645 TGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGG 2635586 Query 204279 CGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGA 204338 ||||| |||||||||||||| ||||| |||||| ||| | ||| |||| ||| || Sbjct 2635585 CGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGA 2635526 Query 204339 CCCTGCGCTTCAGAGAGGTCCAGTCGTGCA--TCGCACTGGGT-TTCACGCCCCACATGT 204395 | | |||||| ||||||| || ||| | | || ||| ||||||||| Sbjct 2635525 TCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTC---TCCCACATGT 2635469 Query 204396 CGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATA-AGGCTGATCC 204454 || |||| | |||||| | |||||| || ||||| ||| ||| || ||| || | Sbjct 2635468 CGTACTGGAGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGA-GC 2635410 Query 204455 TCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGA 204514 ||| | || || | ||| ||| ||| |||| | ||| |||||||| |||||||| Sbjct 2635409 TCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGG 2635350 Query 204515 ACGTTTA--ATCTGGCGGCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGT 204572 | ||| | | ||| ||| || | | || |||| | | || || | || | | Sbjct 2635349 ATGTTGAGCAGCTG--GGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCAT 2635292 Query 204573 CCGCCAAGCCCTGCACTCCGATTCCCAACGGTCTGT 204608 | |||| ||||| || ||||| || | ||| |||| Sbjct 2635291 CGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGT 2635256 Score = 96.9 bits (106), Expect = 6e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | |||||| | ||| || || || |||| Sbjct 2636033 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTCAGTTTTCCGTAGTTCGGCTCAGCGATGT 2635974 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | |||||||| |||||||| ||||||||| ||||| || || ||||| ||||| | | Sbjct 2635973 GGATGTTCAGCGACTGGCTCTGGTCGATG-AAGGCTCCACGGTCTGCCGCCATCCTCAGC 2635915 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | ||||||||| || || ||||| || || || Sbjct 2635914 ACGGTCTTCTGGGAGATTTCCCAAACGGTTTT 2635883 >seq146 Length=1599760 Score = 93.3 bits (102), Expect = 7e-14 Identities = 111/148 (75%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973 || ||| ||||| | ||||||| | ||||||| ||| || || || |||||||| Sbjct 268866 CTTCCATCCGTAAAAGTGCATGCTGGTGAGTTTGCCGTAGTTTGGCTCAGCGATGTGAAT 268925 Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032 |||||||||||| || || |||||| ||| ||| |||||||| ||||| || | | || Sbjct 268926 GTTCAGAGACTGACTCTGATCGATG-TAGGTGCCACGATCTGCTGCCATCTTCAGGACGG 268984 Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTT 204060 | ||||| || || ||||| || || || Sbjct 268985 TTTTCTGGGAGATTTCCCAAACTGTTTT 269012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795115591331600