Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq292 156 1e-32
seq15 129 1e-24
>seq292
Length=796020
Score = 156 bits (172), Expect = 1e-32
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || |||||||| || |||||||| |||| ||||||||| | || || | ||||||
Sbjct 171450 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCT 171391
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || ||||| || | ||||||||| ||| ||| |||||| |||
Sbjct 171390 TCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC 171331
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||||||| ||||||| || | |||||| | | || || |||| || || |||
Sbjct 171330 TGAATCTTTGCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTC 171271
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||||||||| ||||| ||
Sbjct 171270 TTCCCAGTGAGAGTTTTCACGAAAATCTG 171242
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || |||||||| || |||||||| |||| ||||||||| | || || | ||||||
Sbjct 171678 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCT 171619
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || ||||| || | ||||||||| ||| ||| |||||| |||
Sbjct 171618 TCCAGCTGTTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC 171559
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||||||| ||||||| || | ||| || | | || || |||| ||||| |||
Sbjct 171558 TGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTC 171499
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| |||||||| ||||| ||
Sbjct 171498 TTCCCAGTGAGGGTTTTCACGAAAATCTG 171470
>seq15
Length=4650977
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || || |||||||| |||| ||||||||||| || || | ||||||
Sbjct 564362 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 564421
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||||||||| ||||| || | ||||||||| || || || || |||
Sbjct 564422 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 564481
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | |||||| | | || || |||| ||||| |||
Sbjct 564482 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTC 564541
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||
Sbjct 564542 TTGCCGGTGAGGGTCTTGACGAAGATCTG 564570
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| || || || || |||| ||||||||||| || || | ||||||
Sbjct 569628 AGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 569687
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||||||||| ||||| || | ||||||||| || || || || |||
Sbjct 569688 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 569747
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || || | |||||| | | || || || | ||||| ||
Sbjct 569748 TGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTT 569807
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| ||||||||||| || ||
Sbjct 569808 TTGCCGGTGAGGGTTTTCACAAAGATCTG 569836
Score = 123 bits (136), Expect = 6e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||||||||| || || || ||||||| |||||||||| || || | ||||||
Sbjct 564590 AGGACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 564649
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||||||||| ||||| || | ||||||||| || || || || |||
Sbjct 564650 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 564709
Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| || ||| || || ||| || | |||||| | | || || |||| ||||| ||
Sbjct 564710 TGGAT-TTTGGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGT 564768
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || ||||| || ||
Sbjct 564769 TTTGCCGGTGAGGGTCTTGACAAAGATCTG 564798
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||||||||| || || || || |||| ||||||||| | || || | |||||
Sbjct 564134 AGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 564193
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| ||||| || | ||||||||| || || || || |||
Sbjct 564194 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 564253
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||| ||| || | |||||| | | ||| || |||| ||||| |||
Sbjct 564254 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGTTCCACTTCCAGGGTGATGGTC 564313
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || ||
Sbjct 564314 TTGCCGGTGAGGGTCTTGACGAAGATCTG 564342
Score = 95.1 bits (104), Expect = 3e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| || || || || |||| ||||||||||| || || | ||||||
Sbjct 569400 AGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 569459
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || || ||||| || | ||||||||| || || || || |||
Sbjct 569460 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 569519
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||| ||| || | |||||| | | || | || | ||||| ||
Sbjct 569520 TGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCCCCTCAAGGGTGATGGTT 569579
Query 199598 TTACCCGTGAGAGTTTT 199614
|| || ||||| || ||
Sbjct 569580 TTGCCGGTGAGGGTCTT 569596
Score = 86.0 bits (94), Expect = 1e-11
Identities = 129/181 (71%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 199447 GACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACG 199506
|| ||||||||||| || || | ||||||||||||||||| || || ||||| || |
Sbjct 569201 GATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCT 569260
Query 199507 CTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGG 199565
||||||||| || || || || ||||| || ||| || || ||| || | ||
Sbjct 569261 CTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGAT-TTTGGCTTTGACGTTCTCAATGG 569319
Query 199566 TGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTT 199625
|||| | | || || |||| ||||| ||||| || ||||| || || || || || |
Sbjct 569320 TGTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAGATCT 569379
Query 199626 G 199626
|
Sbjct 569380 G 569380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178861406841995
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