Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq15 132 5e-26
>seq15
Length=4650977
Score = 132 bits (146), Expect = 5e-26
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || || | ||| | ||||| || | ||| || || ||||| |||||||| |
Sbjct 569611 TGCCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAG 569670
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || ||||| | || || |||||||| ||||| || |||| | ||||||||| | |
Sbjct 569671 ACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGG 569730
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || |||||| ||| |||||| ||| | || | | ||||| || | ||||
Sbjct 569731 GGATGCCCTCCTTATCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCA 569790
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600
| || | |||||||||||||| || || ||||| |||||||| ||||| ||||||
Sbjct 569791 CCTCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCTTGCAC 569846
Score = 131 bits (144), Expect = 2e-25
Identities = 148/197 (75%), Gaps = 1/197 (1%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| ||||||||||||||||| || || ||||| | || || |||||||| ||||| ||
Sbjct 564611 TCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAG 564670
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| | ||||||||| | || | || |||||| ||| ||| || |||| ||
Sbjct 564671 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCTTTGACGTTC 564730
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | |||||||| | ||||| |||| |||||||||||||| || || || || |||
Sbjct 564731 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACA 564790
Query 46583 AAGATTTGCAT-TTTGC 46598
||||| ||||| |||||
Sbjct 564791 AAGATCTGCATGTTTGC 564807
Score = 129 bits (142), Expect = 7e-25
Identities = 169/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||| | ||| || || | ||| | || || || | ||| || || ||||| |||||
Sbjct 564112 TTACTGGCCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTA 564171
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||||| || ||||| | || || |||||||||||||| || |||| | |||||||||
Sbjct 564172 GTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTC 564231
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539
| || | || |||||| ||| ||| || ||||| || | | |||||||| |
Sbjct 564232 AGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGG 564291
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||| |||| |||||||| ||||| || || || || || ||||| |||||
Sbjct 564292 TTCCACTTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 564345
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || || | ||| | ||||| || | ||| || || ||||| |||||||| |
Sbjct 569383 TGCCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAG 569442
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || ||||| | || || ||||||||||| || || |||| | ||||||||| | |
Sbjct 569443 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGG 569502
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || |||||| ||| ||| || ||||| || | | ||||| || | |||
Sbjct 569503 GGATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCC 569562
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | |||||||||||||| || || || || | ||||| |||||
Sbjct 569563 CCTCAAGGGTGATGGTTTTGCCGGTGAGGGTCTTGCCGAAGATCTGCAT 569611
Score = 91.5 bits (100), Expect = 2e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 46411 GATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCG 46470
||| |||||||| || || ||||| | || || ||||||||||| || || |||| |
Sbjct 569201 GATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCT 569260
Query 46471 CTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGT 46530
||||||||| | || | || |||||| ||| ||| || |||| || | | ||
Sbjct 569261 CTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCTTTGACGTTCTCAATGGT 569320
Query 46531 GTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTG 46590
||| || | || || |||| ||||| || ||||| || || || || || ||||| ||
Sbjct 569321 GTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 569380
Query 46591 CAT 46593
|||
Sbjct 569381 CAT 569383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565210244062200
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