Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq15 134 1e-26
seq169 129 6e-25
seq292 125 7e-24
seq22 102 8e-17
>seq15
Length=4650977
Score = 134 bits (148), Expect = 1e-26
Identities = 171/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || || || || || ||||| ||||||||||||||| | || || ||| |
Sbjct 564805 AAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGCC 564746
Query 38300 CACCGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|| ||||| | || |||| | |||| ||||||| || || ||||| || ||| | |
Sbjct 564745 CAGCGACACCATTGAGAACG-TCAAAGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTG 564687
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||| |||| || | || || || |||||||| || | |||||||| ||||
Sbjct 564686 ACCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACT 564627
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||| |||||||| ||| | || || || | || || ||| |||| || |||
Sbjct 564626 ACAATATCCAAAAAGAATCCACCCTCCACCTTGTCCTCCGTCTGAGGGGTGGC 564574
Score = 132 bits (146), Expect = 5e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || || ||| |
Sbjct 564345 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGC 564286
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||||| || || ||||| || ||| | |||||
Sbjct 564285 GACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCA 564227
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| |||||||| || | |||||||| |||||||||
Sbjct 564226 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCCGACTACAA 564167
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| || ||| | || || || | || || ||| |||| || ||||
Sbjct 564166 CATCCAGAAAGAATCTACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGCC 564117
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || || || ||||| ||||| ||||||||||||||| | || || ||| ||
Sbjct 569842 AAGATGCAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCC 569783
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | |||| | || |||| || || ||||| || ||| | |||
Sbjct 569782 AGTGACACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGAC 569723
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| |||| || | || || || |||||||| || | |||||||| ||||||
Sbjct 569722 CAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTAC 569663
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||| || ||| | || || || |||| || ||| | || || |||
Sbjct 569662 AACATCCAGAAAGAATCCACACTCCACCTGGTCCTCCGTCTCAGGGGTGGC 569612
Score = 122 bits (134), Expect = 9e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||| |
Sbjct 564573 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 564514
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || ||||| || ||| | |||||
Sbjct 564513 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCA 564455
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || || || |||||||| || | |||||||| ||||||||
Sbjct 564454 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 564395
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || || || |||| || ||| | || || |||
Sbjct 564394 CATCCAGAAGGAGTCCACCCTTCACCTGGTCCTCCGTCTCAGGGGTGGC 564346
Score = 122 bits (134), Expect = 9e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || |||| || || ||||| ||||||||||||||| | || | ||| |||
Sbjct 569611 ATGCAGATCTTCGGCAAGACCCTCACCGGCAAAACCATCACCCTTGAGGGGGAGCCCAGT 569552
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||||| || || ||||| || ||| | |||||
Sbjct 569551 GACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCA 569493
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| |||||||| || | |||||||| ||||||||
Sbjct 569492 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 569433
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| || ||| | || || || |||| || ||| | || || |||
Sbjct 569432 CATCCAGAAAGAATCCACACTCCACCTGGTCCTCCGTCTCAGGGGTGGC 569384
Score = 109 bits (120), Expect = 5e-19
Identities = 136/184 (74%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || |||||| | || || ||| |||
Sbjct 569383 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACAATCACCCTGGAAGTTGAGCCCAGT 569324
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| ||||||| || || ||||| || ||| | |||||
Sbjct 569323 GACACCATTGAGAACG-TCAAAGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCA 569265
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| |||||||| || | |||||||| ||||||||
Sbjct 569264 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 569205
Query 38423 CATC 38426
||||
Sbjct 569204 CATC 569201
>seq169
Length=1474717
Score = 129 bits (142), Expect = 6e-25
Identities = 101/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338
||||| || ||||||||||||||||||||||||||||| ||||||| |||||| ||||
Sbjct 1314257 ACCAGGTTCTCGTTGACGATGCCGTCGCTGGCGGCGAAGAAGGCCAACACGTGGGAGATG 1314198
Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398
|| | |||||||| ||| |||| | |||||||| || ||| |||||||||||||||
Sbjct 1314197 AAGTAGCGCTCGTCGTCCTTCAGGGACTCCCAGTGCTGCAGGTCTTTGGACAGGTCCACC 1314138
Query 133399 T 133399
|
Sbjct 1314137 T 1314137
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 132931 ATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATG 132990
||||| ||||||||||| || | ||| ||||| ||||| | || || ||||| || |||
Sbjct 1314837 ATGAGCTCGTTGCTGAAGGTTAGGCCAGGCATCAGGCCTCTCTTCTTCAGCCAGAAGATG 1314778
Query 132991 GCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCA 133042
|||||||| || || ||||||| ||||| ||||| ||||| |||||||
Sbjct 1314777 GCGGCGAACGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGGCCACCA 1314726
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/117 (79%), Gaps = 4/117 (3%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAG--GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGA 133224
||||||||||||||| || | ||||| || ||||| | ||||||||||||||| ||
Sbjct 1314451 GTAGGTGTCGATGAGCAGGCTG--TACATCTCAGAGTGGATGTTCTCCATGGCGATCTGG 1314394
Query 133225 AAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281
|||||||| || |||| ||||| ||||||||| || || | ||| ||||| |||
Sbjct 1314393 AAGCCGTAGAAACACCTGGCCTCTGTCACCTGCACCTCCTGCGTGAAGCGCTCCACC 1314337
>seq292
Length=796020
Score = 125 bits (138), Expect = 7e-24
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| ||||| ||||| || || ||||| ||| | || || ||| |
Sbjct 171235 AAAGATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGGAGCC 171294
Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|| |||| | | | |||| | || | ||| || | || ||||| || ||||| | |
Sbjct 171295 CAGTGACACCATTGAGAACG-TGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTG 171353
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||| |||| || | || || ||||||||||| || | |||||||| ||||
Sbjct 171354 ACCAGCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACT 171413
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||||| ||||| | || || || ||||||| || |||| || |||
Sbjct 171414 ACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGAGGC 171466
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| ||||| || || ||||||||| | || || ||| |||
Sbjct 171467 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAGT 171526
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || | ||| || | || ||||| || ||||| | |||||
Sbjct 171527 GATACCATTGAGAACG-TGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCA 171585
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | || || | || |||||||||||||| || | |||||||| ||||||||
Sbjct 171586 GCAGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAA 171645
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || || || ||||||| || |||| || ||
Sbjct 171646 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGAGG 171693
>seq22
Length=4020106
Score = 102 bits (112), Expect = 8e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||||||| ||||||||||||| | | || | ||| ||||||||||| | || |
Sbjct 3875968 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 3875909
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| | || || ||||| ||| || ||||||| ||||| || || |||||||
Sbjct 3875908 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 3875849
Query 133037 CCACCAGGCGCTCGCC 133052
|||| || ||||| ||
Sbjct 3875848 CCACAAGACGCTCCCC 3875833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500147885142400
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