Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq292 91.5 6e-13 seq621 86.0 2e-11 >seq292 Length=796020 Score = 91.5 bits (100), Expect = 6e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || ||||| || || ||||| || || || || | | Sbjct 171239 ATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGGAGCCCAGT 171298 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || ||| ||||| ||||| ||||| ||||||||||| || Sbjct 171299 GACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAG 171358 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | |||| || | || ||||| || |||||||| | || || |||| || || Sbjct 171359 CAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAAC 171418 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || ||| | || | | ||||| ||| Sbjct 171419 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGA 171463 Score = 86.0 bits (94), Expect = 2e-11 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || ||||| || || || || || || || || | | Sbjct 171467 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAGT 171526 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | || ||| ||||| ||||| ||||| ||||||||||| || Sbjct 171527 GATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAG 171586 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || ||||| || |||||||| | || || |||| || || Sbjct 171587 CAGAGACTGATCTTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAAC 171646 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || ||| | || | | ||||| ||| Sbjct 171647 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGA 171691 >seq621 Length=215567 Score = 86.0 bits (94), Expect = 2e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 |||| ||||||| |||||||||||||||| || ||||| ||||| | ||| |||| || Sbjct 118767 AGCAGTTGGAATCGATCTTGGAACCACCTACTCCTGTGTTGGTGTGTTCCAGCATGGCAA 118826 Query 450973 TGTAGAAATTATAGCAAATGACCAAGG 450999 || ||||| || || ||||||||||| Sbjct 118827 AGTTGAAATCATTGCCAATGACCAAGG 118853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975617524140380