Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq271 228 6e-54
seq621 96.9 3e-14
>seq271
Length=890306
Score = 228 bits (252), Expect = 6e-54
Identities = 940/1471 (64%), Gaps = 20/1471 (1%)
Strand=Plus/Plus
Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308
||| ||| |||| | ||| || || || || ||||| || | |||||| || ||||||||
Sbjct 266367 TTTGTCAACGGCGGACACGTTTAGGATGCCGTTGGCGTCGATATCAAAGGTAACTTCAAT 266426
Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368
|| || || ||||| ||||||| || | || | | ||| | ||||| |||
Sbjct 266427 CTGTGGCACGCCTCTGGGAGCAGGAGGAAGACCAGAGAGCTCAAACTTCCCCAGGAGATT 266486
Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428
|| || || || | || ||||||||| | | || || ||| | | || ||
Sbjct 266487 GTTGTCCTTTGTCATGGCTCTCTCACCCTCGTAGACCTGAATCAAGACTCCTGGCTGGTT 266546
Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGA-ATTGTTGTGTTTCTATCAA 517487
|||||| || || | || | |||| | | | | || || || ||||||| | |
Sbjct 266547 ATCTGAGTATGTGGAGAAGA-TCTGAGTCTGCTTCGTGGGGATGGTGGTGTTTCGCTTGA 266605
Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547
||| | ||||||| ||||| |||||||| | || || || | |||| ||||| |
Sbjct 266606 TAAGAGGTGTCATAACGCCACCGGCTGTTTCAATGCCCAGCGACAAGGGAGCCACATCCA 266665
Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607
|| | | || ||| | ||||| || | ||| | || ||||| || || | |
Sbjct 266666 GGAGCAGTAAATCTTGGACATTTTCTGAGGTGTCACCCATGAGGATAGCAGCCTGGACGG 266725
Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667
| |||||||| || || || |||||||| || | | | ||||| | | |||||||||
Sbjct 266726 CTGCACCATAGGCCACCGCCTCATCAGGGTTGATGCTCTTGTTTAGCTCTCTACCATTGA 266785
Query 517668 AAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727
| || | || || | | | || || || | | || || ||||||| ||||
Sbjct 266786 AGAAGTCCTGCAGGAGCTTTTGGATTTTGGGGATTCTTGTAGAGCCGCCAACTAGGACAA 266845
Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787
||| || | || ||||||||||| || | ||| || | || ||||| || || |
Sbjct 266846 CTTCGTGGATCTTGGATTTATCCAGCTTAGCATCTTGTAGGGCCTTCTCAACTGGCTCCA 266905
Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847
| | || || | ||| || || || ||||| || || || || ||| |
Sbjct 266906 GTGTTCCCCTGAAGAGGTCCGAGTTGAGCTCCTCGAAGCGTGCCCTTGT--GATTGAGGT 266963
Query 517848 -TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC--GAAGAA 517903
|| || ||||| || || || | ||||||| ||||| | | ||||| | || |
Sbjct 266964 GTAAAAGTCAATGCCCTCAAAGAGTGAATCAATCTCAATGCTTGCCTGAGTGCTGGAGGA 267023
Query 517904 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGC 517959
| ||| | | || || | || || ||||| | ||||| | | ||| | | |
Sbjct 267024 CAAAGTCCTCTTT--GCTCTCTCGCAAGCTGTGCGCAGTCTCCTCACCGCTCTCTTGTTC 267081
Query 517960 TGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAG 518019
|| |||| || | || | ||||| || || || || ||| | | || |
Sbjct 267082 TGGCTGATG----TCCTTCTTGTGCTTTCTTTTAAACTCCTCCACAAAGTGGCTGACCAT 267137
Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079
|| || |||||||| || || || | | || | || | || ||| | || | ||
Sbjct 267138 TCGGTTGTCAAAATCCTCCCCACCAAGGTGTGTGTCCCCGGCTGTGGCTTTCACCTCAAA 267197
Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139
| || || |||| | || | | || ||| || || ||||| | |||||| ||
Sbjct 267198 TATGCCGTCCTCAATGGTCAGGATGGACACGTCAAAAGTGCCTCCACCAAGATCAAAGAT 267257
Query 518140 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199
|| || || ||| || | ||| ||||| ||||| |||| || || || ||
Sbjct 267258 GAGGACGTTGCGCTCTCCTCTTTTGCCTTTGTCAAGGCCATAGGCAATGGCTGCCGCTGT 267317
Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259
|| ||||| || || | | |||||| || || | || ||| ||||| || |||||
Sbjct 267318 CGGCTCATTTATGATGCGGAGAACATTTAGTCCGGAGATCACTCCAGCATCCTTTGTGGC 267377
Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCTT 518318
||| ||||| ||||| ||||| || || || || || || || |||| | || |||
Sbjct 267378 TTGCCTTTGGGAATCATTAAAGTAAGCTGGCACTGTGATGACCGCATTCGACACCCTCTG 267437
Query 518319 TACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378
| ||| | | || || ||| | |||||||| | | ||| || ||||| | ||
Sbjct 267438 TCCCAGAA-AGGCCTCGGCTATTTCTCTCATTTTAACCAGGACCATCGAGGAAATCTCTT 267496
Query 518379 CTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAA 518438
| || | || ||| ||| || |||| || | | | || ||
Sbjct 267497 CAGGACAGAATGTCTTAATTTCTCCTTTATATTCCACCTGGACTTTGGGCTTTCCGTTGT 267556
Query 518439 CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 518498
| || || || || || |||||| |||||| || || || || |||||| |||
Sbjct 267557 CGTTGATCACCTTGAAGGGCCAGAGTTTCATGTCAGACTGGACCACCAGGTCATCAAACC 267616
Query 518499 CTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGAT 518558
||| ||||| | ||||| |||||||| || || ||||| || || || ||| |||| |
Sbjct 267617 TTCTTCCAATGAGCCGTTTGGCATCAAAGATTGTGTTGGTGGGGTTCATGGCAACTTGGT 267676
Query 518559 ATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTG 518618
||||| |||||||| || || ||||| || ||||| | || || |||||||
Sbjct 267677 TCTTGGCAGCATCTCCGATGAGCCTCTCTGTGTCAGTAAAGGCCACGTAGCTGGGAGTTG 267736
Query 518619 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678
| | || ||||||||||| ||||||||||| ||||| |||| || | || || ||||
Sbjct 267737 TCCTGTTGCCTTGATCATTGGCAATAATTTCCACTTTTCCATGCTGGAAGACCCCGACAC 267796
Query 518679 AACTAAAAGTTGTTCCTAAATCAATACCAAT 518709
|| | || || || | |||||| |||||
Sbjct 267797 AAGAGTAGGTGGTGCCCAGATCAATGCCAAT 267827
>seq621
Length=215567
Score = 96.9 bits (106), Expect = 3e-14
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||||| || ||||| || || || ||| | |||| |||||||| |||||||||||
Sbjct 118957 CAAAAACTGTGTTGGTAGGGTTCATGGCAACCTGATTCTTGGCTGCGTCTCCAATCAGTC 118898
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
|| || ||||| || | ||||| || || || | || ||||| ||||| ||||
Sbjct 118897 TCTCGGTATCTGTGAAAGCCACATAGCTGGGTGTGGTCCTGTTGCCTTGGTCATTGGCAA 118838
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| ||||||||||| |||| || | ||||| ||||| | || ||||| | ||| |
Sbjct 118837 TGATTTCAACTTTGCCATGCTGGAACACACCAACACAGGAGTAGGTGGTTCCAAGATCGA 118778
Query 518703 TACCAA 518708
| ||||
Sbjct 118777 TTCCAA 118772
Score = 95.1 bits (104), Expect = 9e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || || || ||||| |||| |||||| |||||||||||||| || || | |||||||
Sbjct 119595 TTCTTGTCCAGCCCATAGGCAATAGCAGCTGCAGTTGGTTCATTGATTATACGCAAAACA 119536
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || |||| || | || ||||| || ||||| || | || || || || || ||
Sbjct 119535 TTGAGGCCAGAGATGGTGCCAGCATCCTTGGTGGCCTGACGCTGGGAGTCATTGAAGTAA 119476
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
||||| || || || || ||||
Sbjct 119475 GCAGGTACTGTGATCACAGCAT 119454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780624651173410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |