Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq169 89.7 6e-13 seq22 82.4 9e-11 >seq169 Length=1474717 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||||||||| ||| ||| || | ||||| |||||| |||| Sbjct 1314743 GTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCCGCCATCTTCTGGCTGAAGAAGAGAGGC 1314802 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 || ||||| || || |||| ||||||||| ||| ||| ||||||| Sbjct 1314803 CTGATGCCTGGCCTAACCTTCAGCAACGAGCTCATCAGTCGAGACGAGG 1314851 >seq22 Length=4020106 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| ||||||||||| || || ||| ||||| || ||||| |||||| |||| Sbjct 3875860 GTGGAGGGGATCTTCTTCTCAGGCTCATTCGCTGCTATCTACTGGCTGAAGAAGAGAGGC 3875919 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 ||||||||||| || || ||||||||| || || Sbjct 3875920 CTCATGCCAGGCCTTACCTACTCCAACGAACTCAT 3875954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620711479269200