Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq32 145 9e-30 seq146 91.5 2e-13 seq22 91.5 2e-13 >seq32 Length=3524602 Score = 145 bits (160), Expect = 9e-30 Identities = 942/1488 (63%), Gaps = 50/1488 (3%) Strand=Plus/Minus Query 105841 CTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGAC 105900 |||||| |||| | ||| || || || | | || || |||| ||| || |||||| Sbjct 2635731 CTTCATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGAC 2635672 Query 105901 AATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAA 105960 ||| |||||||| | || || | |||||||| | ||||| | || | Sbjct 2635671 GATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGAT 2635612 Query 105961 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 106020 | | || || || |||| ||| || |||||||| || || ||||| || |||| || || Sbjct 2635611 GGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAG 2635552 Query 106021 ACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA- 106079 ||||| | | || | || ||| ||||| || | | |||||| | | Sbjct 2635551 GCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTC 2635492 Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CCCTTGG-GACGTGGGAGAACC 106137 | | || || || ||||||| || | || || | ||||| |||| | ||| || Sbjct 2635491 GGTCGGCGTCTTCT-CCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGCGAG--CC 2635435 Query 106138 CTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGC 106197 ||| ||||||| |||| || | || | || | ||| ||||| |||||||||| || Sbjct 2635434 CTCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGC 2635375 Query 106198 GTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGC 106257 ||| || ||||| || ||||| | || | | || |||||| || || | Sbjct 2635374 GTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGG 2635315 Query 106258 GTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317 | || || || || |||| || ||||| || || || | || || || ||||| Sbjct 2635314 ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTG 2635255 Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGT 106376 ||| | || ||| | | || || || || || |||| |||| |||| || Sbjct 2635254 GCGCTTGTTGGACGT-CTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGT 2635196 Query 106377 TTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAG 106436 | || ||||| | | ||| |||| || || | | || ||||| || Sbjct 2635195 TGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCG-- 2635138 Query 106437 TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 106496 |||| |||| ||| | |||||||| || |||| ||||| || ||| ||| | Sbjct 2635137 -CTCTGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGT 2635079 Query 106497 CCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAAT 106556 |||| |||||||| | | ||||| || | |||| | || || || |||| | Sbjct 2635078 CCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGT 2635019 Query 106557 TCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 106616 ||| ||||| ||||| ||||||| || |||||||||||||||||||||||||| || | Sbjct 2635018 TCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTT 2634959 Query 106617 CCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCC 106675 | ||||| |||| || || || | ||| | | | ||| || || | || || Sbjct 2634958 CGGTCTGGGACTCGATGATGGCGTACCAGAGCTGCTGCGCCT-TCACCACCCTCTTCACC 2634900 Query 106676 CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGA 106734 | || ||| ||| || | |||||||| || |||||||| ||| | || ||| Sbjct 2634899 CTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCC-CAGCACTCGTC 2634841 Query 106735 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCT--CCTCAACCCGC 106792 || || || || | ||||| | | ||||| | || | ||| || | | Sbjct 2634840 CAGCCCGGGACACTCGCTGGGACACATCAAGGACCA--GTCCTGGTTGCTCTCCACTCTC 2634783 Query 106793 TTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCG 106852 |||||||| ||||| || ||||||| || | || || ||||| | ||| || Sbjct 2634782 TTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCC 2634723 Query 106853 TCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 106911 | ||| ||| || | | ||| ||||| || | | || |||||| || || || Sbjct 2634722 TTTCCTGTGTT-CTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAG 2634664 Query 106912 ATAGACTGCGA------TAGATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTG 106964 || | |||| | || ||| | | ||||| || | || ||||| || | Sbjct 2634663 GTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCC----TGGTCGACGTAGCGAGCCG 2634608 Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 107024 || ||| | || | ||||| || | | || | || | || || || || || Sbjct 2634607 TGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAA 2634548 Query 107025 TACGAGATT------TATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCC 107078 | || || || || | || ||| | || || || |||||||| Sbjct 2634547 T-GTAGCTTCCCGTCGATCGGAT-GCAGCTCACCG----CCACGCCGATCCCCCCAGCGG 2634494 Query 107079 ACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCT 107138 |||| || || |||| |||| | | || || | ||||| || | ||| ||| |||| Sbjct 2634493 ACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCT 2634434 Query 107139 TGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC--TTGGTGTACCAGCATTGAAGAG 107196 | ||| || |||||||| ||||||| |||||| | ||| || || || |||||||| Sbjct 2634433 TCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTG--GTCCCGGCGTTGAAGAG 2634376 Query 107197 GGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAG 107255 ||| || | ||||| ||||| || | | |||| || ||| ||||| | | ||| Sbjct 2634375 GGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAG 2634317 Query 107256 AATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 ||||||||| ||||||||| || | | ||| | ||| | ||||| Sbjct 2634316 CGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGT 2634269 >seq146 Length=1599760 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || |||||| || | || ||||| || | ||| ||| || || || Sbjct 271717 CTCATCTCTACTTGTGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCC 271776 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || ||| | ||||| |||| ||||||| || ||||||||||||||||| ||||| || Sbjct 271777 CAGATTTTGCTGGTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACC 271836 Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 |||||| ||||| |||| || || || | ||| Sbjct 271837 CGTCTCTGTCTGCGACTCGATGATGGCGTACCA 271869 >seq22 Length=4020106 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 |||| || | | ||| ||||| || ||| || |||||||||||||| || | ||||| Sbjct 3875968 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 3875909 Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412 ||| ||| || ||||| |||||| || ||||||||||| |||||||| || || | Sbjct 3875908 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 3875849 Query 117413 CAAAAAGGCGCTC 117425 | | ||| ||||| Sbjct 3875848 CCACAAGACGCTC 3875836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589951411581400