Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq271 183 2e-40
seq292 114 1e-19
seq621 102 7e-16
seq15 98.7 8e-15
seq106 91.5 1e-12
seq64 91.5 1e-12
>seq271
Length=890306
Score = 183 bits (202), Expect = 2e-40
Identities = 403/594 (68%), Gaps = 14/594 (2%)
Strand=Plus/Minus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| || || ||| | || ||||| || |||||| || || | || |||| |||||
Sbjct 267827 ATTGGCATTGATCTGGGCACCACCTACTCTTGTGTCGGGGTCTTCCAGCATGGAAAAGTG 267768
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
||||||||||||||||||||||| ||||| || ||||| || || | || || ||
Sbjct 267767 GAAATTATTGCCAATGATCAAGGCAACAGGACAACTCCCAGCTACGTGGCCTTTACTGAC 267708
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTACCAAT 550171
|| || | | || ||||| || || | ||| |||| || || || |||||
Sbjct 267707 ACAGAGAGGCTCATCGGAGATGCTGCCAAGAACCAAGTTGCCA-TG--AACCCCACCAAC 267651
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| || |||||||| ||||| | ||||||||||| ||| |||| | || ||| |
Sbjct 267650 ACAATCTTTGATGCCAAACGGCTCATTGGAAGAAGGTTTGATGACCTGGTGGTCCAGTCT 267591
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
|| ||||| | ||||| ||| | | | || | ||||| || | | | || |
Sbjct 267590 GACATGAAACTCTGGCCCTTCAAGGTGATCAACGACAACGGAAAGCC-CAAAGTCCAGGT 267532
Query 550292 --ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | || ||||| |||| ||| | || ||| | ||||| || ||||| |
Sbjct 267531 GGAAT-ATAAAGGAGAAATTAAGACATTCTGTCCTGAAGAGATTTCCTCGATGGTCCTGG 267473
Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409
| ||||||| | ||| |||| || ||| | || || || || |||| || || |
Sbjct 267472 TTAAAATGAGAGAAATAGCCGAGGCCTTTCTGGGACAGAGGGTGTCGAATGCGGTCATCA 267413
Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469
| || ||||| || |||||||| || ||| | ||||| || || ||||||||| ||
Sbjct 267412 CAGTGCCAGCTTACTTTAATGATTCCCAAAGGCAAGCCACAAAGGATGCTGGAGTGATCT 267353
Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529
| ||||| |||||||| || || || ||||| || || || || || |||| ||||| |
Sbjct 267352 CCGGACTAAATGTTCTCCGCATCATAAATGAGCCGACAGCGGCAGCCATTGCCTATGGCC 267293
Query 550530 TTGATAAA--CATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581
|||| ||| || || || ||| | || || |||||||||||| ||| ||
Sbjct 267292 TTGACAAAGGCA-AAAGA-GGAGAGCGCAACGTCCTCATCTTTGATCTTGGTGG 267241
Score = 154 bits (170), Expect = 1e-31
Identities = 435/666 (65%), Gaps = 8/666 (1%)
Strand=Plus/Minus
Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972
|| |||||||| ||||| || | || | || || | ||||| | | ||||| |
Sbjct 267053 ACAGCTTGCGAGAGAGCAAAGAGGACTTTGTCCTCCAGCACTCAGGCAAGCATTGAGATT 266994
Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032
|||||| | |||||||| ||||| | | | || | || | ||||| || || ||
Sbjct 266993 GATTCACTCTTTGAGGGCATTGACTTTTACACCTCAATCACAAGGGCACGCTTCGAGGAG 266934
Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092
| || || ||||| || |||| | || ||||| || | | || |||| |
Sbjct 266933 CTCAACTCGGACCTCTTCAGGGGAACACTGGAGCCAGTTGAGAAGGCCCTACAAGATGCT 266874
Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152
||| | ||||||||||| | || ||| |||| || ||||| || ||||||||||| ||
Sbjct 266873 AAGCTGGATAAATCCAAGATCCACGAAGTTGTCCTAGTTGGCGGCTCTACAAGAATCCCC 266814
Query 552153 AAAATTCGCGAAATG----TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGT 552208
||||| | ||| | | || ||| |||||||||| | | |||| | || |
Sbjct 266813 AAAAT---CCAAAAGCTCCTGCAGGACTT-CTTCAATGGTAGAGAGCTAAACAAGAGCAT 266758
Query 552209 TAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACA 552268
|| || |||||||| || ||||||||||| || | || || ||||| || || |
Sbjct 266757 CAACCCTGATGAGGCGGTGGCCTATGGTGCAGCCGTCCAGGCTGCTATCCTCATGGGTGA 266698
Query 552269 AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTT 552328
|| ||||| | ||| || | | || | ||||| |||| | || || || |
Sbjct 266697 CACCTCAGAAAATGTCCAAGATTTACTGCTCCTGGATGTGGCTCCCTTGTCGCTGGGCAT 266638
Query 552329 AGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAA 552388
||||||| || || ||||||| ||||||| | |||| || || || || ||
Sbjct 266637 TGAAACAGCCGGTGGCGTTATGACACCTCTTATCAAGCGAAACACCACCATCCCCACGAA 266578
Query 552389 AAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTT 552448
| ||| | || || || || |||||||| || | | || ||||| | |
Sbjct 266577 GCAGACTCAGATCTTCTCCACATACTCAGATAACCAGCCAGGAGTCTTGATTCAGGTCTA 266518
Query 552449 TGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGG 552508
|| || || ||| | || || || || |||| || || | ||| | | ||
Sbjct 266517 CGAGGGTGAGAGAGCCATGACAAAGGACAACAATCTCCTGGGGAAGTTTGAGCTCTCTGG 266458
Query 552509 TATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAA 552568
| ||||||||||||| | || || || || ||||||||||| || |||||||| |||||
Sbjct 266457 TCTTCCTCCTGCTCCCAGAGGCGTGCCACAGATTGAAGTTACCTTTGATATCGACGCCAA 266398
Query 552569 TGGAAT 552574
|| ||
Sbjct 266397 CGGCAT 266392
>seq292
Length=796020
Score = 114 bits (126), Expect = 1e-19
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| || ||||| || || || ||||| ||| | ||| || ||||| || | ||
Sbjct 171460 CCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGG--ATGTTGTAGTCCGACAGG 171403
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || ||||| || ||||| || || || ||||| |||||||||||
Sbjct 171402 GTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATG 171343
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||||||||| ||||| ||| || || |||||| || ||| || | | || ||
Sbjct 171342 CCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTGTCACTG-GGCTCCACCTC 171284
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| |||| || || ||||| |||||||| |||||||| |||||
Sbjct 171283 CAGGGTAATGGTCTTCCCAGTGAGAGTTTTCACGAAAATCTGCAT 171239
Score = 114 bits (126), Expect = 1e-19
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| || ||||| || || || ||||| ||| | ||| || ||||| || | ||
Sbjct 171688 CCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGG--ATGTTGTAGTCCGACAGG 171631
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || ||||| || ||||| || ||||| ||||| |||||||||||
Sbjct 171630 GTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGGAATG 171571
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||||||||| ||||| ||| || || |||||| |||||| || | | || ||
Sbjct 171570 CCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTG-GGCTCCACCTC 171512
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || | || || ||||| || ||||| |||||||| |||||
Sbjct 171511 CAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 171467
>seq621
Length=215567
Score = 102 bits (112), Expect = 7e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || || || ||||| || || || |||||||| || ||||| || || || ||||
Sbjct 119454 ATGCTGTGATCACAGTACCTGCTTACTTCAATGACTCCCAGCGTCAGGCCACCAAGGATG 119513
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| || |||| || |||||| | ||||| ||||||||||| ||||| |||||
Sbjct 119514 CTGGCACCATCTCTGGCCTCAATGTTTTGCGTATAATCAATGAACCAACTGCAGCTGCTA 119573
Query 550518 TTGCATATGGACTTGATAA 550536
|||| ||||| || || ||
Sbjct 119574 TTGCCTATGGGCTGGACAA 119592
Score = 95.1 bits (104), Expect = 1e-13
Identities = 137/188 (73%), Gaps = 8/188 (4%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || ||| | |||||||| || ||||||||||| | || |||| |||||||||
Sbjct 118774 GGAATCGATCTTGGAACCACCTACTCCTGTGTTGGTGTGTTCCAGCATGGCAAAGTTGAA 118833
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| ||||||||||| ||||| ||||| || || || ||||| ||||||| || ||
Sbjct 118834 ATCATTGCCAATGACCAAGGCAACAGGACCACACCCAGCTATGTGGCTTTCACAGATACC 118893
Query 550118 GA-ACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATAC 550173
|| | | | | |||| || ||||| || |||| |||| || || |||||||| ||
Sbjct 118894 GAGAGACTGA-TTGGAGACGCAGCCAAGAATCAGGTTGCCA-TG--AACCCTACCAACAC 118949
Query 550174 TATTTTTG 550181
||||||
Sbjct 118950 AGTTTTTG 118957
Score = 89.7 bits (98), Expect = 4e-12
Identities = 76/94 (81%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565
||| |||||||||||||||||||| || || || ||||| || || |||||||| |||||
Sbjct 120681 AGGAATTCCTCCTGCTCCTCGTGGCGTTCCACAGATTGAGGTGACATTCGATATTGATGC 120740
Query 552566 CAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599
||||| || ||||||| ||||| ||| |||
Sbjct 120741 TAATGGCATCATGAATGTCTCTGCTGTTGACAAA 120774
>seq15
Length=4650977
Score = 98.7 bits (108), Expect = 8e-15
Identities = 157/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| |||||||| ||||| || ||||| |||||| |||||||| |||| || ||
Sbjct 564580 CCTCAGACGGAGGACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGT 564639
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| |||||| || || ||||||||||| || || || ||||| ||||| || || ||
Sbjct 564640 GCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 564699
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGA 563431
|| ||||| || ||||| ||| || |||||| || || || | | || || |
Sbjct 564700 CTCCTTATCCTGGATTTTGGCTTTGACGTTCTCAATGGTGTCGCTG-GGCTCCACCTCCA 564758
Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| || | ||||| || || || || || || || || |||||
Sbjct 564759 GGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 564801
Score = 89.7 bits (98), Expect = 4e-12
Identities = 155/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
|||||||||||| || || || || || |||||| || ||||| |||| || ||
Sbjct 569618 CCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGT 569677
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| |||||| || || ||||||||||| || || || ||||| ||||| || || ||
Sbjct 569678 GCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 569737
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGA 563431
|| ||||| || || || || || |||||| || ||| || | | || || |
Sbjct 569738 CTCCTTATCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCACTG-GGCTCCACCTCAA 569796
Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| || | ||||| || || || ||||| || || || |||||
Sbjct 569797 GGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 569839
>seq106
Length=2002839
Score = 91.5 bits (100), Expect = 1e-12
Identities = 102/135 (76%), Gaps = 1/135 (1%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
||||||| || || || || || || || |||||||| || |||||||| || ||||| |
Sbjct 707187 ATGCAGTTATCACAGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACCAAAGACG 707128
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| || || | || || ||||| ||||| |||||||||||||| || || || ||
Sbjct 707127 CCGGTACCATCTCCGGCCTCAATGTGCTTCGCATTATCAATGAACCCACAGCCGCAGCCA 707068
Query 550518 TTGCATATGGACTTG 550532
||||||| || ||||
Sbjct 707067 TTGCATACGG-CTTG 707054
>seq64
Length=2651320
Score = 91.5 bits (100), Expect = 1e-12
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || | |||||||| || || || |||||||| || || || || || |||||||
Sbjct 2077077 ATGCCGTGGTGACTGTACCTGCCTACTTCAATGACTCTCAGCGCCAGGCCACCAAAGATG 2077018
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| ||| |||| || |||||||| ||||| || || || || || ||||||||
Sbjct 2077017 CTGGGACCATTTCTGGGCTCAATGTTCTGCGTATCATTAACGAGCCAACAGCTGCTGCCA 2076958
Query 550518 TTGCATATGG 550527
|||| || ||
Sbjct 2076957 TTGCTTACGG 2076948
Score = 91.5 bits (100), Expect = 1e-12
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || | |||||||| || || || |||||||| || || || || || |||||||
Sbjct 2089983 ATGCCGTGGTGACTGTACCTGCCTACTTCAATGACTCTCAGCGCCAGGCCACCAAAGATG 2089924
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| ||| |||| || |||||||| ||||| || || || || || ||||||||
Sbjct 2089923 CTGGGACCATTTCTGGGCTCAATGTTCTGCGTATCATTAACGAGCCAACAGCTGCTGCCA 2089864
Query 550518 TTGCATATGG 550527
|||| || ||
Sbjct 2089863 TTGCTTACGG 2089854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029085255227650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |