Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq82 152 6e-32 >seq82 Length=2326230 Score = 152 bits (168), Expect = 6e-32 Identities = 570/877 (65%), Gaps = 29/877 (3%) Strand=Plus/Plus Query 160085 GTCAACGTCTTC---GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCA 160141 |||| || |||| ||| || |||||||| || || || || | ||| |||| ||| Sbjct 591461 GTCATCGACTTCTGGGTCAAACTTATTTGCAAAGAGGTGCTG--CTGTCTC-AGGAGCCA 591517 Query 160142 GTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGG 160201 | | ||| |||| || |||| || |||| | ||| || | || || Sbjct 591518 CAGGAGGTCGCCGGCGCCATACACACACACGGCTCTCCTGTAGGTCCCCATACATGGATA 591577 Query 160202 GTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTAT 160261 |||| |||||||||| |||||| ||| | || |||||| |||| | ||| | Sbjct 591578 GTACGGAGCTCCTTTTTTCACGTCTCCTGTTAAATAAGACCACTTGACAACTCGGGCGAG 591637 Query 160262 CGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGG 160321 ||| ||||||| || ||||| |||||| | |||| || | || ||||| || Sbjct 591638 AGCCAGCATGTCCGACGTGTCATATTTGCCGTTTGGGGGCACTGATCCAGGAACCGAGGA 591697 Query 160322 CATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTC 160381 ||| | ||| ||||||||||||| ||||||||| || ||||| ||||| || |||||| Sbjct 591698 CATCCTCTGCAGGGTGGCCCACATGTGTTCGTCTGGACTGTATGTGTCTTTTTCCCATTC 591757 Query 160382 CATGAACTCTCCGATTAAC-CTGTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGA 160440 |||||| | || || | |||| | ||| |||| | || ||| || | || | Sbjct 591758 CATGAA-TTTCTGAACCTCTCTGTTCTGCATCACGTATTTCACAAAGGCCCTAGAGACCA 591816 Query 160441 CAAAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTG-TCTTTGTCCTGA 160499 ||||||| ||| | || ||||| || || | || ||||| | | | ||| || | Sbjct 591817 CAAAGTAGGCGTTTCCTGAGAACATTGGGCTACTGATGGGCGGTGGGCTTTTTCTCACGT 591876 Query 160500 CCGGTGTTAGACACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACC-ATCTT 160558 ||| | | | || || || | | ||| | | || ||| | |||| |||| Sbjct 591877 CCGTTCT----GATGACGCCGTTGGCGACATTGTGGTGGTACTGCCAGC-GACCTTTCTT 591931 Query 160559 G--TGCGGTGGCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGC 160616 | | ||| || ||| || || | ||||| || | ||| |||||| | Sbjct 591932 GGAGACACTGG--TGACTTCAGTTTCCATGCTGTTCCTCCCATTGAGGACTTTCAGAGCC 591989 Query 160617 TTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTAC 160676 | || ||||| || || |||| |||||||| || || || || | | ||| Sbjct 591990 ATCACCATCTCCCTATTGGTTTTGATGGGAAAGTCTGTCCCACAGGTATTCAAAAGGTAT 592049 Query 160677 TTCCATTTCGCGC-TCAG-GTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGC 160734 ||||| || | |||| || |||| || ||||||| || | |||||||||||| | Sbjct 592050 TTCCA--CCGAACTTCAGAGTGCAGCAGATCTTTCATGCAGTTCAGATCTGCCTGCACTC 592107 Query 160735 GGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAAC 160794 | ||| ||||| ||||| || | |||| ||||||||| ||||| || || || | Sbjct 592108 TGGACCATGAAGCATACACAACACTTTCTAATTTACTGGCTACAAAAACATTGGGAAAGC 592167 Query 160795 ACGACACGATTCCCACCACCGCC---AGAAAGAACATCTTATCCGCCTTTCGGTCCACGT 160851 | || || | | || ||| ||| |||| ||| | | ||| |||| | | Sbjct 592168 AGGAAACTACTTCCTTCACAGCCCTGTGAAAAGACAGGGAA---GACTTCTGGTCAATAT 592224 Query 160852 GCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTA 160911 | ||||| || | |||||| || || || || | | || | | || |||||||||| Sbjct 592225 GGACGCAGTAGATGTTCTGCGGAGCATAAATAGATCGTAGGAGTCGTTCAAACATCTCTA 592284 Query 160912 TCTTATGATGGATCACGATAGAGTAGGCTATCGGAAA 160948 |||| | |||||||| || ||||| || || ||||| Sbjct 592285 TCTTCTCGTGGATCACCATGGAGTATGCAATGGGAAA 592321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577190447268600