Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq82 152 6e-32
>seq82
Length=2326230
Score = 152 bits (168), Expect = 6e-32
Identities = 570/877 (65%), Gaps = 29/877 (3%)
Strand=Plus/Plus
Query 160085 GTCAACGTCTTC---GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCA 160141
|||| || |||| ||| || |||||||| || || || || | ||| |||| |||
Sbjct 591461 GTCATCGACTTCTGGGTCAAACTTATTTGCAAAGAGGTGCTG--CTGTCTC-AGGAGCCA 591517
Query 160142 GTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGG 160201
| | ||| |||| || |||| || |||| | ||| || | || ||
Sbjct 591518 CAGGAGGTCGCCGGCGCCATACACACACACGGCTCTCCTGTAGGTCCCCATACATGGATA 591577
Query 160202 GTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTAT 160261
|||| |||||||||| |||||| ||| | || |||||| |||| | ||| |
Sbjct 591578 GTACGGAGCTCCTTTTTTCACGTCTCCTGTTAAATAAGACCACTTGACAACTCGGGCGAG 591637
Query 160262 CGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGG 160321
||| ||||||| || ||||| |||||| | |||| || | || ||||| ||
Sbjct 591638 AGCCAGCATGTCCGACGTGTCATATTTGCCGTTTGGGGGCACTGATCCAGGAACCGAGGA 591697
Query 160322 CATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTC 160381
||| | ||| ||||||||||||| ||||||||| || ||||| ||||| || ||||||
Sbjct 591698 CATCCTCTGCAGGGTGGCCCACATGTGTTCGTCTGGACTGTATGTGTCTTTTTCCCATTC 591757
Query 160382 CATGAACTCTCCGATTAAC-CTGTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGA 160440
|||||| | || || | |||| | ||| |||| | || ||| || | || |
Sbjct 591758 CATGAA-TTTCTGAACCTCTCTGTTCTGCATCACGTATTTCACAAAGGCCCTAGAGACCA 591816
Query 160441 CAAAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTG-TCTTTGTCCTGA 160499
||||||| ||| | || ||||| || || | || ||||| | | | ||| || |
Sbjct 591817 CAAAGTAGGCGTTTCCTGAGAACATTGGGCTACTGATGGGCGGTGGGCTTTTTCTCACGT 591876
Query 160500 CCGGTGTTAGACACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACC-ATCTT 160558
||| | | | || || || | | ||| | | || ||| | |||| ||||
Sbjct 591877 CCGTTCT----GATGACGCCGTTGGCGACATTGTGGTGGTACTGCCAGC-GACCTTTCTT 591931
Query 160559 G--TGCGGTGGCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGC 160616
| | ||| || ||| || || | ||||| || | ||| |||||| |
Sbjct 591932 GGAGACACTGG--TGACTTCAGTTTCCATGCTGTTCCTCCCATTGAGGACTTTCAGAGCC 591989
Query 160617 TTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTAC 160676
| || ||||| || || |||| |||||||| || || || || | | |||
Sbjct 591990 ATCACCATCTCCCTATTGGTTTTGATGGGAAAGTCTGTCCCACAGGTATTCAAAAGGTAT 592049
Query 160677 TTCCATTTCGCGC-TCAG-GTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGC 160734
||||| || | |||| || |||| || ||||||| || | |||||||||||| |
Sbjct 592050 TTCCA--CCGAACTTCAGAGTGCAGCAGATCTTTCATGCAGTTCAGATCTGCCTGCACTC 592107
Query 160735 GGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAAC 160794
| ||| ||||| ||||| || | |||| ||||||||| ||||| || || || |
Sbjct 592108 TGGACCATGAAGCATACACAACACTTTCTAATTTACTGGCTACAAAAACATTGGGAAAGC 592167
Query 160795 ACGACACGATTCCCACCACCGCC---AGAAAGAACATCTTATCCGCCTTTCGGTCCACGT 160851
| || || | | || ||| ||| |||| ||| | | ||| |||| | |
Sbjct 592168 AGGAAACTACTTCCTTCACAGCCCTGTGAAAAGACAGGGAA---GACTTCTGGTCAATAT 592224
Query 160852 GCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTA 160911
| ||||| || | |||||| || || || || | | || | | || ||||||||||
Sbjct 592225 GGACGCAGTAGATGTTCTGCGGAGCATAAATAGATCGTAGGAGTCGTTCAAACATCTCTA 592284
Query 160912 TCTTATGATGGATCACGATAGAGTAGGCTATCGGAAA 160948
|||| | |||||||| || ||||| || || |||||
Sbjct 592285 TCTTCTCGTGGATCACCATGGAGTATGCAATGGGAAA 592321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577190447268600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |