Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq32 163 3e-35
seq22 91.5 2e-13
seq146 82.4 9e-11
>seq32
Length=3524602
Score = 163 bits (180), Expect = 3e-35
Identities = 950/1495 (64%), Gaps = 50/1495 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||| |||| | | || ||||||||| ||||||||| ||| |
Sbjct 2634262 CCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATTGACGCTGCC 2634321
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| || |||| | | || ||||| ||||| | || ||||||||
Sbjct 2634322 ATCGAGACCTACAACCTCCTGTCGGAGAAGTG-GTTCACCCACGCCTCTCCGACCCTCTT 2634380
Query 75331 CAATGCTGGTAC--ACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||| || || || ||| | |||||| ||||||| |||||||| || ||| |||||
Sbjct 2634381 CAACGCCGGGACCAACC--GGCCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGGAC 2634438
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| ||| | || ||||| | || || | | |||| |||| || || |||| |||
Sbjct 2634439 GACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCT 2634498
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAAT------AAATCTCGTATTCGG 75502
||||| || || || | ||| || | || || || || |||
Sbjct 2634499 GGGGGGATCGGCGTG----GCGGTGAGCTG-CATCCGATCGACGGGAAGCT-ACATTGCC 2634552
Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562
|| || || || | || | || | | || ||||| | || | ||| ||| ||
Sbjct 2634553 GGCACCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCT 2634612
Query 75563 CGCTATGTAAATCAAGCGGGGCGTC-GCAAG------GGGTCCATCGCGGTCTACTTGGA 75615
||||| | || | | ||||| | |||| ||| || |||| | ||| ||||
Sbjct 2634613 CGCTACG----TCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGA 2634668
Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAG 75674
||| ||||| ||| | | || ||||| ||| | | || ||| ||| | || |
Sbjct 2634669 ACCGTGGCACTTCGACGTGTTCGACTTCCTGGAGCTGAAGA-AGAACACAGGAAAGGAGG 2634727
Query 75675 AGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734
|| | ||||| || || | || ||||||| || ||||| ||||||||| | |
Sbjct 2634728 AGCAGAGAGCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAGAGAG 2634787
Query 75735 T--TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA 75792
| ||| | || | ||||| | | ||||| | || || || || |||
Sbjct 2634788 TGGAGAGCAACCAGG--ACTGGTCCTTGATGTGTCCCAGCGAGTGTCCCGGGCTGGACGA 2634845
Query 75793 -CGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCA 75851
|| | ||| |||||||| || |||||||| | ||||| |||| || || | |
Sbjct 2634846 GTGCTG-GGGAGAGGAGTTCGAGAAGCTCTACACCAGATATGAGAAGGAAGGGAGGGTGA 2634904
Query 75852 ATGCGACTGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910
| | | || || ||| | | | ||| | || || || | || ||||| || ||
Sbjct 2634905 A-GAGGGTGGTGAAGGCGCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCGAAACC 2634963
Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970
|| || || || ||||| |||||||| ||||| |||| |||||| ||||| |||| ||
Sbjct 2634964 GGGACGCCCTACATGCTCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAACCTG 2635023
Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030
|| || ||||| || || || ||||| || | | |||||||| ||||| |||
Sbjct 2635024 GGCACCATCAAATGCAGCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGGACGAG 2635083
Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGC 76090
||| || ||||| |||| || |||||||| | ||| |||| |||| ||
Sbjct 2635084 GTGGCCGTCTGCAACCTGGCCTCCATCGCCCTCAACATGTACGTCACGCCAGAG---CGG 2635140
Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGA 76150
||||| || | | || || |||| ||| | | ||||| || |||
Sbjct 2635141 ACTTTCGACTTCAAGAAGCTGGCCTCCGTCACCAAGGTAATCGTGAAAAACCTCAACAAG 2635200
Query 76151 GTCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209
|||| |||| |||| || || || || || | | ||| || | ||| |||||
Sbjct 2635201 ATCATCGACATCAATTACTACCCGGTCCCCGAAGCCGAG-ACGTCCAACAAGCGCCACAG 2635259
Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269
|| || || | || || || ||||| || |||| || || || || | | ||
Sbjct 2635260 GCCGATCGGGATCGGCGTCCAGGGTCTGGCCGATGCCTTCATCCTGATGCGACATCCGTT 2635319
Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329
|| |||||| || | | || | ||||| || ||||| || ||||| |
Sbjct 2635320 CGAAAGCCCCGAAGCCCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACCACGCCGC 2635379
Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389
||||||||| || || ||| | || | || | || |||| ||||||| ||||| |
Sbjct 2635380 CCTGGAGGCCAGCTGCGAACTCGCCGCAGAGCTCGGCCCCTACGAGACATACGAGGG--C 2635437
Query 76390 TCCCGCGTC-CCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAA 76446
|| | |||| ||||| | || |||| || ||||||| || || || | | |
Sbjct 2635438 TCGCCCGTCAGTAAGGGCATCCTCCAGTACGACATGTGGG-AGAAGACGCCGACCGACCT 2635496
Query 76447 CTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506
| |||||| | | || ||||| ||| | | || | | ||||| || |
Sbjct 2635497 GTGGGACTGGAAGCTGCTGAAGGAGAAGATCGCCAAACACGGCGTGAGGAACAGCCTGCT 2635556
Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566
| |||| || ||||| || || |||||||| || ||| |||| || || || | | | ||
Sbjct 2635557 GCTGGCGCCCATGCCCACGGCGTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGA 2635616
Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626
| ||||| | ||||||||| | || || | || ||||| || |||||
Sbjct 2635617 GGCGTACACCAGCAACATCTACACCCGCAGGGTGCTGTCCGGAGAGTTCCAGATCGTCAA 2635676
Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681
| |||||| |||| ||||| | | || || || ||| | |||| ||||||
Sbjct 2635677 CCCTCACCTCCTCAAGGACCTGACGGAGCGCGGCCTGTGGAACGAGGAGATGAAG 2635731
>seq22
Length=4020106
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCT 65136
||||| ||| | || || || |||||||| ||||||||||| || |||||| |||
Sbjct 3875836 GAGCGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATCTTCTTCTCAGGCTCATTCGCTGCT 3875895
Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196
|| || ||| |||||||| | || |||||||||||||| || ||| || ||||| |||
Sbjct 3875896 ATCTACTGGCTGAAGAAGAGAGGCCTCATGCCAGGCCTTACCTACTCCAACGAACTCATT 3875955
Query 65197 TCCCGAGATGAGG 65209
| | || ||||
Sbjct 3875956 AGCAGGGACGAGG 3875968
>seq146
Length=1599760
Score = 82.4 bits (90), Expect = 9e-11
Identities = 117/165 (71%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 76189 AAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATT 76248
|||||| || | ||| ||||| |||||||| | ||||| || ||||| || |||| ||
Sbjct 270724 AAAGTCCAACAAGCGTCACAGGCCTATTGGAATCGGTGTGCAGGGTCTGGCTGATGCCTT 270665
Query 76249 TATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTT 76308
||| | |||||| ||||||| || ||| || | || || |||||
Sbjct 270664 TATCCTCATGCGCTACCCATTTGAAAGCCCAGAGGCCCAGTTACTCAACATTCACATCTT 270605
Query 76309 TGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353
||||||||| || |||| |||||||||| |||||||| ||||
Sbjct 270604 TGAAACCATCTACTACGCCGCCCTGGAGGCCAGTTGTGAGCTGGC 270560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596539883376800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |