Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq32 163 3e-35 seq22 91.5 2e-13 seq146 82.4 9e-11 >seq32 Length=3524602 Score = 163 bits (180), Expect = 3e-35 Identities = 950/1495 (64%), Gaps = 50/1495 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| |||| | | || ||||||||| ||||||||| ||| | Sbjct 2634262 CCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATTGACGCTGCC 2634321 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || |||| | | || ||||| ||||| | || |||||||| Sbjct 2634322 ATCGAGACCTACAACCTCCTGTCGGAGAAGTG-GTTCACCCACGCCTCTCCGACCCTCTT 2634380 Query 75331 CAATGCTGGTAC--ACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||| || || || ||| | |||||| ||||||| |||||||| || ||| ||||| Sbjct 2634381 CAACGCCGGGACCAACC--GGCCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGGAC 2634438 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| ||| | || ||||| | || || | | |||| |||| || || |||| ||| Sbjct 2634439 GACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCT 2634498 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAAT------AAATCTCGTATTCGG 75502 ||||| || || || | ||| || | || || || || ||| Sbjct 2634499 GGGGGGATCGGCGTG----GCGGTGAGCTG-CATCCGATCGACGGGAAGCT-ACATTGCC 2634552 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || || || | || | || | | || ||||| | || | ||| ||| || Sbjct 2634553 GGCACCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCT 2634612 Query 75563 CGCTATGTAAATCAAGCGGGGCGTC-GCAAG------GGGTCCATCGCGGTCTACTTGGA 75615 ||||| | || | | ||||| | |||| ||| || |||| | ||| |||| Sbjct 2634613 CGCTACG----TCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGA 2634668 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAG 75674 ||| ||||| ||| | | || ||||| ||| | | || ||| ||| | || | Sbjct 2634669 ACCGTGGCACTTCGACGTGTTCGACTTCCTGGAGCTGAAGA-AGAACACAGGAAAGGAGG 2634727 Query 75675 AGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734 || | ||||| || || | || ||||||| || ||||| ||||||||| | | Sbjct 2634728 AGCAGAGAGCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAGAGAG 2634787 Query 75735 T--TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA 75792 | ||| | || | ||||| | | ||||| | || || || || ||| Sbjct 2634788 TGGAGAGCAACCAGG--ACTGGTCCTTGATGTGTCCCAGCGAGTGTCCCGGGCTGGACGA 2634845 Query 75793 -CGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCA 75851 || | ||| |||||||| || |||||||| | ||||| |||| || || | | Sbjct 2634846 GTGCTG-GGGAGAGGAGTTCGAGAAGCTCTACACCAGATATGAGAAGGAAGGGAGGGTGA 2634904 Query 75852 ATGCGACTGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910 | | | || || ||| | | | ||| | || || || | || ||||| || || Sbjct 2634905 A-GAGGGTGGTGAAGGCGCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCGAAACC 2634963 Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970 || || || || ||||| |||||||| ||||| |||| |||||| ||||| |||| || Sbjct 2634964 GGGACGCCCTACATGCTCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAACCTG 2635023 Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || || ||||| || || || ||||| || | | |||||||| ||||| ||| Sbjct 2635024 GGCACCATCAAATGCAGCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGGACGAG 2635083 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGC 76090 ||| || ||||| |||| || |||||||| | ||| |||| |||| || Sbjct 2635084 GTGGCCGTCTGCAACCTGGCCTCCATCGCCCTCAACATGTACGTCACGCCAGAG---CGG 2635140 Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGA 76150 ||||| || | | || || |||| ||| | | ||||| || ||| Sbjct 2635141 ACTTTCGACTTCAAGAAGCTGGCCTCCGTCACCAAGGTAATCGTGAAAAACCTCAACAAG 2635200 Query 76151 GTCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 |||| |||| |||| || || || || || | | ||| || | ||| ||||| Sbjct 2635201 ATCATCGACATCAATTACTACCCGGTCCCCGAAGCCGAG-ACGTCCAACAAGCGCCACAG 2635259 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269 || || || | || || || ||||| || |||| || || || || | | || Sbjct 2635260 GCCGATCGGGATCGGCGTCCAGGGTCTGGCCGATGCCTTCATCCTGATGCGACATCCGTT 2635319 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 || |||||| || | | || | ||||| || ||||| || ||||| | Sbjct 2635320 CGAAAGCCCCGAAGCCCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACCACGCCGC 2635379 Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 ||||||||| || || ||| | || | || | || |||| ||||||| ||||| | Sbjct 2635380 CCTGGAGGCCAGCTGCGAACTCGCCGCAGAGCTCGGCCCCTACGAGACATACGAGGG--C 2635437 Query 76390 TCCCGCGTC-CCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAA 76446 || | |||| ||||| | || |||| || ||||||| || || || | | | Sbjct 2635438 TCGCCCGTCAGTAAGGGCATCCTCCAGTACGACATGTGGG-AGAAGACGCCGACCGACCT 2635496 Query 76447 CTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 | |||||| | | || ||||| ||| | | || | | ||||| || | Sbjct 2635497 GTGGGACTGGAAGCTGCTGAAGGAGAAGATCGCCAAACACGGCGTGAGGAACAGCCTGCT 2635556 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | |||| || ||||| || || |||||||| || ||| |||| || || || | | | || Sbjct 2635557 GCTGGCGCCCATGCCCACGGCGTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGA 2635616 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 | ||||| | ||||||||| | || || | || ||||| || ||||| Sbjct 2635617 GGCGTACACCAGCAACATCTACACCCGCAGGGTGCTGTCCGGAGAGTTCCAGATCGTCAA 2635676 Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681 | |||||| |||| ||||| | | || || || ||| | |||| |||||| Sbjct 2635677 CCCTCACCTCCTCAAGGACCTGACGGAGCGCGGCCTGTGGAACGAGGAGATGAAG 2635731 >seq22 Length=4020106 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCT 65136 ||||| ||| | || || || |||||||| ||||||||||| || |||||| ||| Sbjct 3875836 GAGCGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATCTTCTTCTCAGGCTCATTCGCTGCT 3875895 Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196 || || ||| |||||||| | || |||||||||||||| || ||| || ||||| ||| Sbjct 3875896 ATCTACTGGCTGAAGAAGAGAGGCCTCATGCCAGGCCTTACCTACTCCAACGAACTCATT 3875955 Query 65197 TCCCGAGATGAGG 65209 | | || |||| Sbjct 3875956 AGCAGGGACGAGG 3875968 >seq146 Length=1599760 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 76189 AAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATT 76248 |||||| || | ||| ||||| |||||||| | ||||| || ||||| || |||| || Sbjct 270724 AAAGTCCAACAAGCGTCACAGGCCTATTGGAATCGGTGTGCAGGGTCTGGCTGATGCCTT 270665 Query 76249 TATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTT 76308 ||| | |||||| ||||||| || ||| || | || || ||||| Sbjct 270664 TATCCTCATGCGCTACCCATTTGAAAGCCCAGAGGCCCAGTTACTCAACATTCACATCTT 270605 Query 76309 TGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353 ||||||||| || |||| |||||||||| |||||||| |||| Sbjct 270604 TGAAACCATCTACTACGCCGCCCTGGAGGCCAGTTGTGAGCTGGC 270560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596539883376800