Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq42 87.8 5e-12 >seq42 Length=3028220 Score = 87.8 bits (96), Expect = 5e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || ||||| || || || ||||| | | || ||||| || |||||||| | ||| Sbjct 504921 GTCTTGACAGCCGTGTCGATCAGACCCTCTCTGCCTCCCATGGCGTGGAAGAAGAACTCG 504980 Query 302680 TCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 ||| ||| ||||| | | ||||| |||| ||||| || || |||||| | Sbjct 504981 GTCGG-CGTCAGCCCGGCCAGGTAGGAGTTCTCCACGAAGCCTCGGCTCTCGGGGCCGTA 505039 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| |||| | ||||| ||||| || | || || | ||| | ||||| ||||| || Sbjct 505040 GTCGTCCTTGATGAAGTGAGGCAGCGTGCGGTGCTTGAACCCGAAGGGGATTCGCTTACC 505099 Query 302799 ATCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 505100 CTCCACGTTCTGCTGGCCCA 505119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471742452212945