Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq515 134 1e-26
seq292 86.0 5e-12
>seq515
Length=310103
Score = 134 bits (148), Expect = 1e-26
Identities = 133/172 (77%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
|| ||||| || ||||||||||| || ||||||| |||||| || | |||||| ||||||
Sbjct 42631 AGGTCAGTTTCAGGGTTGTCACACTCAGGACACAGCACAAATTTTCTGATGAACCCATCA 42690
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|||| ||||| ||||| | |||||||| |||||||||||| | || |||||||||
Sbjct 42691 AGCATATCCTGCAACTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGATCGTTTTTG 42750
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486
||| | ||| || || || || || || || || || |||| |||||||
Sbjct 42751 GTATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTCGGGT 42802
>seq292
Length=796020
Score = 86.0 bits (94), Expect = 5e-12
Identities = 150/217 (69%), Gaps = 1/217 (0%)
Strand=Plus/Plus
Query 110267 TTTAAA-ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325
|||||| ||||| || || || |||||| | || || || ||||||||| | || |||
Sbjct 171232 TTTAAAGATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGGA 171291
Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGT 110385
||| || || | | | || || |||||| || ||||||||| | ||
Sbjct 171292 GCCCAGTGACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCC 171351
Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445
|| || || || || || | ||| |||||||||||||| |||| | | || || ||||
Sbjct 171352 TGACCAGCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGA 171411
Query 110446 TTACAACATTCAAAAAGAATCTACGTTGCACATGGTG 110482
|||||||| || || || || || | ||| |||||
Sbjct 171412 CTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTG 171448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412821549444605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |