Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq515 134 1e-26 seq292 86.0 5e-12 >seq515 Length=310103 Score = 134 bits (148), Expect = 1e-26 Identities = 133/172 (77%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || ||||||| |||||| || | |||||| |||||| Sbjct 42631 AGGTCAGTTTCAGGGTTGTCACACTCAGGACACAGCACAAATTTTCTGATGAACCCATCA 42690 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| ||||| ||||| | |||||||| |||||||||||| | || ||||||||| Sbjct 42691 AGCATATCCTGCAACTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGATCGTTTTTG 42750 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || || || || || || || || |||| ||||||| Sbjct 42751 GTATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTCGGGT 42802 >seq292 Length=796020 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/217 (69%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 110267 TTTAAA-ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325 |||||| ||||| || || || |||||| | || || || ||||||||| | || ||| Sbjct 171232 TTTAAAGATGCAGATTTTCGTGAAAACTCTCACTGGGAAGACCATTACCCTGGAGGTGGA 171291 Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGT 110385 ||| || || | | | || || |||||| || ||||||||| | || Sbjct 171292 GCCCAGTGACACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCC 171351 Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445 || || || || || || | ||| |||||||||||||| |||| | | || || |||| Sbjct 171352 TGACCAGCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGA 171411 Query 110446 TTACAACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 |||||||| || || || || || | ||| ||||| Sbjct 171412 CTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTG 171448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412821549444605