Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq271 228 6e-54
seq621 95.1 9e-14
>seq271
Length=890306
Score = 228 bits (252), Expect = 6e-54
Identities = 938/1470 (64%), Gaps = 18/1470 (1%)
Strand=Plus/Plus
Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475
||| ||| |||| | ||| || || || || ||||| || | |||||| || ||||||||
Sbjct 266367 TTTGTCAACGGCGGACACGTTTAGGATGCCGTTGGCGTCGATATCAAAGGTAACTTCAAT 266426
Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535
|| || || ||||| ||||||| || | || | | ||| | ||||| |||
Sbjct 266427 CTGTGGCACGCCTCTGGGAGCAGGAGGAAGACCAGAGAGCTCAAACTTCCCCAGGAGATT 266486
Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595
|| || || || | || ||||||||| | | || || ||| | | || ||
Sbjct 266487 GTTGTCCTTTGTCATGGCTCTCTCACCCTCGTAGACCTGAATCAAGACTCCTGGCTGGTT 266546
Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGA-ATTGTTGTGTTTCTATCAA 281654
|||||| || || | || | |||| | | | | || || || ||||||| | |
Sbjct 266547 ATCTGAGTATGTGGAGAAGA-TCTGAGTCTGCTTCGTGGGGATGGTGGTGTTTCGCTTGA 266605
Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714
||| | ||||||| ||||| |||||||| | || || || | |||| ||||| |
Sbjct 266606 TAAGAGGTGTCATAACGCCACCGGCTGTTTCAATGCCCAGCGACAAGGGAGCCACATCCA 266665
Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 281774
|| | | || ||| | ||||| || | ||| | || ||||| || || | |
Sbjct 266666 GGAGCAGTAAATCTTGGACATTTTCTGAGGTGTCACCCATGAGGATAGCAGCCTGGACGG 266725
Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834
| |||||||| || || || |||||||| || | | | ||||| | | |||||||||
Sbjct 266726 CTGCACCATAGGCCACCGCCTCATCAGGGTTGATGCTCTTGTTTAGCTCTCTACCATTGA 266785
Query 281835 AAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894
| || | || || | | | || || || | | || || ||||||| ||||
Sbjct 266786 AGAAGTCCTGCAGGAGCTTTTGGATTTTGGGGATTCTTGTAGAGCCGCCAACTAGGACAA 266845
Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 281954
||| || | || ||||||||||| || | ||| || | || ||||| || || |
Sbjct 266846 CTTCGTGGATCTTGGATTTATCCAGCTTAGCATCTTGTAGGGCCTTCTCAACTGGCTCCA 266905
Query 281955 GACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 282014
| | || || | ||| || || || ||||| || || || || ||| |
Sbjct 266906 GTGTTCCCCTGAAGAGGTCCGAGTTGAGCTCCTCGAAGCGTGCCCTTGT--GATTGAGGT 266963
Query 282015 -TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTC--GAAGAA 282070
|| || ||||| || || || | ||||||| ||||| | | ||||| | || |
Sbjct 266964 GTAAAAGTCAATGCCCTCAAAGAGTGAATCAATCTCAATGCTTGCCTGAGTGCTGGAGGA 267023
Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGC 282126
| ||| | | || || | || || ||||| | ||||| | | ||| | | |
Sbjct 267024 CAAAGTCCTCTTT--GCTCTCTCGCAAGCTGTGCGCAGTCTCCTCACCGCTCTCTTGTTC 267081
Query 282127 TGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAG 282186
|| |||| || | || | ||||| || || || || ||| | | || |
Sbjct 267082 TGGCTGATG----TCCTTCTTGTGCTTTCTTTTAAACTCCTCCACAAAGTGGCTGACCAT 267137
Query 282187 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 282246
|| || |||||||| || || || | | || | || | || ||| | || | ||
Sbjct 267138 TCGGTTGTCAAAATCCTCCCCACCAAGGTGTGTGTCCCCGGCTGTGGCTTTCACCTCAAA 267197
Query 282247 AAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAAT 282306
| || || |||| | || | | || ||| || || ||||| | |||||| ||
Sbjct 267198 TATGCCGTCCTCAATGGTCAGGATGGACACGTCAAAAGTGCCTCCACCAAGATCAAAGAT 267257
Query 282307 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 282366
|| || || ||| || | ||| ||||| ||||| |||| || || || ||
Sbjct 267258 GAGGACGTTGCGCTCTCCTCTTTTGCCTTTGTCAAGGCCATAGGCAATGGCTGCCGCTGT 267317
Query 282367 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426
|| ||||| || || | | |||||| || || | || ||| ||||| || |||||
Sbjct 267318 CGGCTCATTTATGATGCGGAGAACATTTAGTCCGGAGATCACTCCAGCATCCTTTGTGGC 267377
Query 282427 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTT 282486
||| ||||| ||||| ||||| || || || || || || || |||| | || |
Sbjct 267378 TTGCCTTTGGGAATCATTAAAGTAAGCTGGCACTGTGATGACCGCATTCGACACCCTCTG 267437
Query 282487 TCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 282546
||| | | | || ||| ||| | |||||||| | | ||| || ||||| | |||
Sbjct 267438 TCCCAGAAAGGCCTCGGCTATTTCTCTCATTTTAACCAGGACCATCGAGGAAATCTCTTC 267497
Query 282547 TGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 282606
||| | || ||| ||| || |||| || | | | || || |
Sbjct 267498 AGGACAGAATGTCTTAATTTCTCCTTTATATTCCACCTGGACTTTGGGCTTTCCGTTGTC 267557
Query 282607 ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 282666
|| || || || || ||||| |||||| || || || || |||||| |||
Sbjct 267558 GTTGATCACCTTGAAGGGCCAGAGTTTCATGTCAGACTGGACCACCAGGTCATCAAACCT 267617
Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726
||| ||||| | ||||| |||||||| || || ||||| || || | ||| |||| |
Sbjct 267618 TCTTCCAATGAGCCGTTTGGCATCAAAGATTGTGTTGGTGGGGTTCATGGCAACTTGGTT 267677
Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786
||||| |||||||| || || ||||| || ||||| | || || ||||||||
Sbjct 267678 CTTGGCAGCATCTCCGATGAGCCTCTCTGTGTCAGTAAAGGCCACGTAGCTGGGAGTTGT 267737
Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846
| || ||||||||||| ||||||||||| ||||| |||| || | || || |||||
Sbjct 267738 CCTGTTGCCTTGATCATTGGCAATAATTTCCACTTTTCCATGCTGGAAGACCCCGACACA 267797
Query 282847 ACTAAAAGTTGTTCCTAAATCAATACCAAT 282876
| | || || || | |||||| |||||
Sbjct 267798 AGAGTAGGTGGTGCCCAGATCAATGCCAAT 267827
>seq621
Length=215567
Score = 95.1 bits (104), Expect = 9e-14
Identities = 110/147 (75%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || || || ||||| |||| |||||| |||||||||||||| || || | |||||||
Sbjct 119595 TTCTTGTCCAGCCCATAGGCAATAGCAGCTGCAGTTGGTTCATTGATTATACGCAAAACA 119536
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || |||| || | || ||||| || ||||| || | || || || || || ||
Sbjct 119535 TTGAGGCCAGAGATGGTGCCAGCATCCTTGGTGGCCTGACGCTGGGAGTCATTGAAGTAA 119476
Query 282452 GCAGGAACAGTAATAACGGCATCTGTT 282478
||||| || || || || |||| ||||
Sbjct 119475 GCAGGTACTGTGATCACAGCAT-TGTT 119450
Score = 93.3 bits (102), Expect = 3e-13
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
|||||| || ||||| || || | ||| | |||| |||||||| |||||||||||
Sbjct 118957 CAAAAACTGTGTTGGTAGGGTTCATGGCAACCTGATTCTTGGCTGCGTCTCCAATCAGTC 118898
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
|| || ||||| || | ||||| || || || | || ||||| ||||| ||||
Sbjct 118897 TCTCGGTATCTGTGAAAGCCACATAGCTGGGTGTGGTCCTGTTGCCTTGGTCATTGGCAA 118838
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
| ||||||||||| |||| || | ||||| ||||| | || ||||| | ||| |
Sbjct 118837 TGATTTCAACTTTGCCATGCTGGAACACACCAACACAGGAGTAGGTGGTTCCAAGATCGA 118778
Query 282870 TACCAA 282875
| ||||
Sbjct 118777 TTCCAA 118772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740434753340610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |