Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 9e-13 >seq1 Length=7371162 Score = 89.7 bits (98), Expect = 9e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436 |||| | |||||||| | || || ||||| || || ||| | || || |||||||||| Sbjct 2797625 GAGCTCTCTGGTGGTATTTCATCTCCAAAGGCATCGAGTACCTGGACACGGTGTTTTTCA 2797684 Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496 | || ||||||||||| || || || | ||| || ||||| || || || | || |||| Sbjct 2797685 TTCTGAGGAAAAAGTTCAACCAGGTCACCTTCCTGCACGTCTACCACCACTGCACCATGT 2797744 Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | || | | ||| | || || || ||| | || ||||| ||| Sbjct 2797745 TCACGCTGTGGTGGATCGGCATCAAGTGGGTGGCCGGAGGACAG 2797788 Score = 89.7 bits (98), Expect = 9e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436 |||| | |||||||| | || || ||||| || || ||| | || || |||||||||| Sbjct 2810052 GAGCTCTCTGGTGGTATTTCATCTCCAAAGGCATCGAGTACCTGGACACGGTGTTTTTCA 2810111 Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496 | || ||||||||||| || || || | ||| || ||||| || || || | || |||| Sbjct 2810112 TTCTGAGGAAAAAGTTCAACCAGGTCACCTTCCTGCACGTCTACCACCACTGCACCATGT 2810171 Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | || | | ||| | || || || ||| | || ||||| ||| Sbjct 2810172 TCACGCTGTGGTGGATCGGCATCAAGTGGGTGGCCGGAGGACAG 2810215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903366198829600