Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq428 107 3e-18
seq380 105 9e-18
seq763 104 3e-17
seq302 104 3e-17
seq176 104 3e-17
seq652 96.9 5e-15
seq2027 87.8 2e-12
seq1672 87.8 2e-12
>seq428
Length=446940
Score = 107 bits (118), Expect = 3e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715
||||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 305993 ATTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 306052
Query 8716 TCCCCGACGAGGAG 8729
||||||||| ||||
Sbjct 306053 TCCCCGACGGGGAG 306066
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 276890 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 276949
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 276950 CCCCGACGGGGAG 276962
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 410182 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 410241
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 410242 CCCGACGGGGAG 410253
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 276891 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 276950
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 276951 CCCGACGGGGAGG 276963
Score = 102 bits (112), Expect = 1e-16
Identities = 69/76 (91%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 305992 CATTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 306051
Query 11786 TTCCCCGACGAGGAGG 11801
|||||||||| |||||
Sbjct 306052 TTCCCCGACGGGGAGG 306067
Score = 102 bits (112), Expect = 1e-16
Identities = 69/76 (91%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 410179 CACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 410238
Query 11786 TTCCCCGACGAGGAGG 11801
|||||||||| |||||
Sbjct 410239 TTCCCCGACGGGGAGG 410254
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 276962 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 276903
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 276902 TACTAACGAGGA 276891
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 306066 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 306007
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 306006 TACTAACGAGGA 305995
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 410253 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 410194
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 410193 TACTAACGAGGA 410182
>seq380
Length=662588
Score = 105 bits (116), Expect = 9e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 8651 GCCTTAT-TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGG 8709
|| |||| ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||
Sbjct 548274 GCGTTATCTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 548215
Query 8710 TTCGATTCCCCGACGAGGAG 8729
||||||||||||||| ||||
Sbjct 548214 TTCGATTCCCCGACGGGGAG 548195
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 548266 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 548207
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 548206 CCCGACGGGGAG 548195
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 548195 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 548254
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 548255 TACTAACGAGGA 548266
>seq763
Length=119288
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 13057 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13116
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 13117 CCCGACGGGGAG 13128
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 13057 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13116
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 13117 CCCGACGGGGAG 13128
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||
Sbjct 13129 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 13070
Query 139412 ATACTAACGAGGA 139424
|||||||||||||
Sbjct 13069 ATACTAACGAGGA 13057
>seq302
Length=968941
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 207885 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 207944
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 207945 CCCGACGGGGAG 207956
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 228819 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 228878
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 228879 CCCGACGGGGAG 228890
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 229453 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 229512
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 229513 CCCGACGGGGAG 229524
Score = 102 bits (112), Expect = 1e-16
Identities = 71/78 (91%), Gaps = 2/78 (3%)
Strand=Plus/Plus
Query 11725 CCCAG-TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782
||||| ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||
Sbjct 207879 CCCAGCTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 207938
Query 11783 CGATTCCCCGACGAGGAG 11800
||||||||||||| ||||
Sbjct 207939 CGATTCCCCGACGGGGAG 207956
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 228819 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 228878
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 228879 CCCGACGGGGAG 228890
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 229453 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 229512
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 229513 CCCGACGGGGAG 229524
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 214009 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 214068
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 214069 CCCGACGGGGAG 214080
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 226374 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 226315
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 226314 CCCGACGGGGAG 226303
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 226801 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 226742
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 226741 CCCGACGGGGAG 226730
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 228084 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 228143
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 228144 CCCGACGGGGAG 228155
Score = 96.9 bits (106), Expect = 5e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 214009 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 214068
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 214069 CCCGACGGGGAGG 214081
Score = 96.9 bits (106), Expect = 5e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 226801 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 226742
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 226741 CCCGACGGGGAGG 226729
Score = 96.9 bits (106), Expect = 5e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 228084 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 228143
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 228144 CCCGACGGGGAGG 228156
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||
Sbjct 228891 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 228832
Query 139412 ATACTAACGAGGA 139424
|||||||||||||
Sbjct 228831 ATACTAACGAGGA 228819
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||
Sbjct 229525 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 229466
Query 139412 ATACTAACGAGGA 139424
|||||||||||||
Sbjct 229465 ATACTAACGAGGA 229453
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 207956 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 207897
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 207896 TACTAACGAGGA 207885
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 209027 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 209086
Query 8718 CCCGACGAGGAG 8729
||| ||| ||||
Sbjct 209087 CCCAACGGGGAG 209098
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||||||||| | |||||||||||| || ||||
Sbjct 225210 TCCTCGTTAGTATAGTGGTGAGTATCCCCGTCTGTCACGTGGGAGACCGGGGATCAATTC 225151
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 225150 CCCGACGGGGAG 225139
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 226374 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 226315
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 226314 CCCGACGGGGAG 226303
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 209027 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 209086
Query 11789 CCCGACGAGGAGG 11801
||| ||| |||||
Sbjct 209087 CCCAACGGGGAGG 209099
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||||||||| | |||||||||||| || ||||
Sbjct 225210 TCCTCGTTAGTATAGTGGTGAGTATCCCCGTCTGTCACGTGGGAGACCGGGGATCAATTC 225151
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 225150 CCCGACGGGGAGG 225138
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 226303 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 226362
Query 139413 TACTAACGAGGATTT 139427
|||||||||||| ||
Sbjct 226363 TACTAACGAGGAGTT 226377
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 226730 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 226789
Query 139413 TACTAACGAGGATTT 139427
|||||||||||| ||
Sbjct 226790 TACTAACGAGGAGTT 226804
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 214080 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 214021
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 214020 TACTAACGAGGA 214009
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 228155 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 228096
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 228095 TACTAACGAGGA 228084
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||| ||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 209098 CTCCCCGTTGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 209039
Query 139413 TACTAACGAGGATTT 139427
|||||||||||| ||
Sbjct 209038 TACTAACGAGGAGTT 209024
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | || |||||||||||| | |||| ||||||||| | |||||||
Sbjct 225139 CTCCCCGTCGGGGAATTGATCCCCGGTCTCCCACGTGACAGACGGGGATACTCACCACTA 225198
Query 139413 TACTAACGAGGATTT 139427
|||||||||||| ||
Sbjct 225199 TACTAACGAGGAGTT 225213
>seq176
Length=1459804
Score = 104 bits (114), Expect = 3e-17
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 269881 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 269940
Query 8718 CCCGACGAGGAGCAG 8732
||||||| |||| ||
Sbjct 269941 CCCGACGGGGAGTAG 269955
Score = 100 bits (110), Expect = 4e-16
Identities = 70/77 (91%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 11726 CCAG-TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTC 11783
|||| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||
Sbjct 269876 CCAGCTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 269935
Query 11784 GATTCCCCGACGAGGAG 11800
|||||||||||| ||||
Sbjct 269936 GATTCCCCGACGGGGAG 269952
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||
Sbjct 269953 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 269894
Query 139412 ATACTAACGAGGA 139424
|||||||||||||
Sbjct 269893 ATACTAACGAGGA 269881
>seq652
Length=179840
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||| |||||
Sbjct 137905 TCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGTGGGAGACCGGGGTTAGATTC 137846
Query 8718 CCCGACGAGGAGC 8730
||||||| |||||
Sbjct 137845 CCCGACGGGGAGC 137833
Score = 93.3 bits (102), Expect = 6e-14
Identities = 75/88 (85%), Gaps = 2/88 (2%)
Strand=Plus/Minus
Query 11715 GGTTGTGTAACCCAG-TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGA 11772
||||| | || ||| ||||||||||||||||||| ||||| |||| ||||| | ||||
Sbjct 137921 GGTTGGGCAAAACAGGTCCTCGTTAGTATAGTGGTCAGTATCCCCGCCTGTCACGTGGGA 137862
Query 11773 GACCGGGGTTCGATTCCCCGACGAGGAG 11800
|||||||||| |||||||||||| ||||
Sbjct 137861 GACCGGGGTTAGATTCCCCGACGGGGAG 137834
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| || |||||||||||||| | |||| |||||||| | |||||||
Sbjct 137834 CTCCCCGTCGGGGAATCTAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 137893
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 137894 TACTAACGAGGA 137905
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||| ||||||||||||| || || ||| |||||| |||||||||||||||||||
Sbjct 138316 TCCTCTTTAGTATAGTGGTCAGCATCGCCGCCTGTCGGGTTGGAGACCGGGGTTCGATTC 138257
Query 8718 CCCGACGAGGAGC 8730
||||||| |||||
Sbjct 138256 CCCGACGGGGAGC 138244
>seq2027
Length=1428
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
||||||||||||||||||| ||||| || ||||| | ||| ||||||||||||||||
Sbjct 1157 TTCCTCGTTAGTATAGTGGACAGTATCTTCGCCTGTCACGCGGAAGACCGGGGTTCGATT 1098
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 1097 CCCCGACGGGGAG 1085
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||||||||||||||| ||||| || ||||| | ||| |||||||||||||||||
Sbjct 1156 TCCTCGTTAGTATAGTGGACAGTATCTTCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1097
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 1096 CCCGACGGGGAGG 1084
>seq1672
Length=5673
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||| |||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||
Sbjct 4328 TCCTTGTTAGTATAGTGGTAAGTATCCCCACCTGTCACGCGGGAGACCGGGCTTCGATTA 4269
Query 8718 CCCGACGAGGAGC 8730
||||||| |||||
Sbjct 4268 CCCGACGGGGAGC 4256
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||| ||||||||||||||| |||| ||| ||||| | |||||||||||| |||||||
Sbjct 4329 GTCCTTGTTAGTATAGTGGTAAGTATCCCCACCTGTCACGCGGGAGACCGGGCTTCGATT 4270
Query 11788 CCCCGACGAGGAG 11800
||||||| ||||
Sbjct 4269 ACCCGACGGGGAG 4257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652812280168400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |