Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq32 250 2e-61
seq292 120 3e-22
>seq32
Length=3524602
Score = 250 bits (276), Expect = 2e-61
Identities = 995/1538 (65%), Gaps = 50/1538 (3%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| | || ||||| || | |||||| | | | || | ||||| ||| | | |
Sbjct 2635676 TTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCC 2635617
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
|| | ||||| || ||||| | || ||||| |||| || || |||||| ||||| |
Sbjct 2635616 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGC 2635557
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071
| || || | || |||| ||| || ||||||| || || |||||||||
Sbjct 2635556 AGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTT-CCAGTCCCA 2635498
Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129
|| ||| | |||||| | |||||||||||||||||| | || |||| ||||
Sbjct 2635497 CAGGTCG--GTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGC 2635440
Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAA-TTCACAGCTTGCCTCGAG 147188
||| || | || |||| ||| || ||||| | | ||| ||||| ||||| ||
Sbjct 2635439 GAGCCCTCGTATGTCTCGTAGGGGCCGA-GCTCTGCGGCGAGTTCGCAGCTGGCCTCCAG 2635381
Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248
|| | | ||| ||||| ||| ||| || |||| || | ||||| ||| ||
Sbjct 2635380 GGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTC 2635321
Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308
| | || |||| || | ||||||||||||| |||||||| |||| ||||| ||
Sbjct 2635320 GAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGG 2635261
Query 147309 TCGATGCTTTTCGTTG-----CTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCA 147363
| || | |||| || |||||| | | || |||| ||| ||
Sbjct 2635260 CCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACC-----GGGTAGTAATTGATGTCG 2635206
Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423
|| |||||||||||||| ||| | || || || | | || |||| ||| ||
Sbjct 2635205 ATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCG 2635146
Query 147424 TAAGTCCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482
|||||| ||| || |||||| || ||| | |||||| || ||||| ||||||||
Sbjct 2635145 AAAGTCCGCTCTGGCGTGACGTAC--AT--GTTGAGGGCGATGGAGGCCAGGTTGCAGAC 2635090
Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542
|||| ||| || | | |||||| ||| | || | ||| |||||||||||||| ||
Sbjct 2635089 GGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGAT 2635030
Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
| |||| || ||||| ||||| |||| ||||| ||||| ||| |||||||||| ||
Sbjct 2635029 GGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGG 2634970
Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA-TGCAGGTCCTGCGC--TC-GCA 147658
||||| ||| || | || | ||| | || || | |||||| || ||
Sbjct 2634969 CGTCCCGGTTTCGGTCTGGGACTCGATGAT-GGCGTACCAGAGCTGCTGCGCCTTCACCA 2634911
Query 147659 CCCGCTGCCGATAGCGGCCC-TCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCG 147717
||| || | | | ||| || || || || | ||| | | ||| ||||| ||
Sbjct 2634910 CCCTCTTC----ACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCT 2634855
Query 147718 CCGTAGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATGTCGTC 147776
|| |||| ||| | || |||||||||| | || |||||||||| ||||| | ||
Sbjct 2634854 CCCCAGCACTCGTCCAGCCCGGGACACTCGCTG-GGACACATCAAGGACCAGTCCTGGTT 2634796
Query 147777 CGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGC--GC 147834
| || | ||| ||||| ||||| | ||||| ||||| | ||| || | ||
Sbjct 2634795 GCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGC 2634736
Query 147835 GCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCG 147894
|| ||| ||||| || |||| |||| | || | | | | |||| |
Sbjct 2634735 TCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAG 2634678
Query 147895 TGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCGACA 147951
||||| ||||| | ||| | ||| | || || | | || ||||||||||||||
Sbjct 2634677 TGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACG 2634618
Query 147952 TGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTG 148011
| ||| || ||||||| | || | || ||| || ||| ||| | | ||||||||
Sbjct 2634617 TAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTG 2634558
Query 148012 GTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCG 148071
||| || | ||| || | ||| | | ||| ||||| || || ||
Sbjct 2634557 GTGCCGGCAATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCA 2634498
Query 148072 CCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCG 148131
|| |||| || ||| ||||| | || || ||||||||| ||||||||||||
Sbjct 2634497 GCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCG 2634438
Query 148132 TTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG--CGTTCCCGCCG-AG 148188
| || | | |||| || || ||| ||||| ||| | ||||| || |
Sbjct 2634437 TCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGG---CCGGTTGGTCCCGGCGTTG 2634381
Query 148189 AAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATA 148248
|| ||||| ||| ||||| || ||| | || | || | | || ||||| ||
Sbjct 2634380 AAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATG 2634321
Query 148249 GCGTCTTCGATGTCGTCG-CCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGG 148307
|| | || ||||| ||| ||||| || || | || || | ||||||||||||||| ||
Sbjct 2634320 GCAGCGTCAATGTC-TCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGG 2634262
Query 148308 TCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACC 148367
|| ||||| |||| ||||||||| || || || || || || ||| ||||
Sbjct 2634261 CCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACC 2634202
Query 148368 AAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGG 148405
||| | ||||| |||||| |||||| |||||
Sbjct 2634201 GAAGAAGTTGTAGGAGAAATCTCTGTCGTAAATGATGG 2634164
>seq292
Length=796020
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || ||||||||||| || ||| || |||||| ||||||||||| | |
Sbjct 171432 GACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 171373
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
||||||| | ||| || || ||||| |||||||||||||| ||| ||| ||||
Sbjct 171372 AAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTCACG 171313
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | |||||||| || | || | || || ||||| ||||||||
Sbjct 171312 TTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTCCCAGTGAGAGTTTTC 171253
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 171252 ACGAAAATCTGCAT 171239
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || ||||||||||| || ||| || |||||| |||||||| || | |
Sbjct 171660 GACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCA 171601
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| || || ||||| |||||||||||||| ||| ||| ||||
Sbjct 171600 AAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTCACG 171541
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | |||||||| || | || | || || ||||| || |||||
Sbjct 171540 TTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTC 171481
Query 132110 ATGAAAATCTGCATGACT 132127
| ||||||||||||| ||
Sbjct 171480 ACGAAAATCTGCATGCCT 171463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476587458804600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |