Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq32 250 2e-61 seq292 120 3e-22 >seq32 Length=3524602 Score = 250 bits (276), Expect = 2e-61 Identities = 995/1538 (65%), Gaps = 50/1538 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| | || ||||| || | |||||| | | | || | ||||| ||| | | | Sbjct 2635676 TTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCC 2635617 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || | ||||| || ||||| | || ||||| |||| || || |||||| ||||| | Sbjct 2635616 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGC 2635557 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071 | || || | || |||| ||| || ||||||| || || ||||||||| Sbjct 2635556 AGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTT-CCAGTCCCA 2635498 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 || ||| | |||||| | |||||||||||||||||| | || |||| |||| Sbjct 2635497 CAGGTCG--GTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGC 2635440 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAA-TTCACAGCTTGCCTCGAG 147188 ||| || | || |||| ||| || ||||| | | ||| ||||| ||||| || Sbjct 2635439 GAGCCCTCGTATGTCTCGTAGGGGCCGA-GCTCTGCGGCGAGTTCGCAGCTGGCCTCCAG 2635381 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248 || | | ||| ||||| ||| ||| || |||| || | ||||| ||| || Sbjct 2635380 GGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTC 2635321 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | | || |||| || | ||||||||||||| |||||||| |||| ||||| || Sbjct 2635320 GAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGG 2635261 Query 147309 TCGATGCTTTTCGTTG-----CTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCA 147363 | || | |||| || |||||| | | || |||| ||| || Sbjct 2635260 CCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACC-----GGGTAGTAATTGATGTCG 2635206 Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423 || |||||||||||||| ||| | || || || | | || |||| ||| || Sbjct 2635205 ATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCG 2635146 Query 147424 TAAGTCCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482 |||||| ||| || |||||| || ||| | |||||| || ||||| |||||||| Sbjct 2635145 AAAGTCCGCTCTGGCGTGACGTAC--AT--GTTGAGGGCGATGGAGGCCAGGTTGCAGAC 2635090 Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 |||| ||| || | | |||||| ||| | || | ||| |||||||||||||| || Sbjct 2635089 GGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGAT 2635030 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 | |||| || ||||| ||||| |||| ||||| ||||| ||| |||||||||| || Sbjct 2635029 GGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGG 2634970 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA-TGCAGGTCCTGCGC--TC-GCA 147658 ||||| ||| || | || | ||| | || || | |||||| || || Sbjct 2634969 CGTCCCGGTTTCGGTCTGGGACTCGATGAT-GGCGTACCAGAGCTGCTGCGCCTTCACCA 2634911 Query 147659 CCCGCTGCCGATAGCGGCCC-TCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCG 147717 ||| || | | | ||| || || || || | ||| | | ||| ||||| || Sbjct 2634910 CCCTCTTC----ACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCT 2634855 Query 147718 CCGTAGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATGTCGTC 147776 || |||| ||| | || |||||||||| | || |||||||||| ||||| | || Sbjct 2634854 CCCCAGCACTCGTCCAGCCCGGGACACTCGCTG-GGACACATCAAGGACCAGTCCTGGTT 2634796 Query 147777 CGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGC--GC 147834 | || | ||| ||||| ||||| | ||||| ||||| | ||| || | || Sbjct 2634795 GCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGC 2634736 Query 147835 GCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCG 147894 || ||| ||||| || |||| |||| | || | | | | |||| | Sbjct 2634735 TCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAG 2634678 Query 147895 TGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCGACA 147951 ||||| ||||| | ||| | ||| | || || | | || |||||||||||||| Sbjct 2634677 TGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACG 2634618 Query 147952 TGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTG 148011 | ||| || ||||||| | || | || ||| || ||| ||| | | |||||||| Sbjct 2634617 TAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTG 2634558 Query 148012 GTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCG 148071 ||| || | ||| || | ||| | | ||| ||||| || || || Sbjct 2634557 GTGCCGGCAATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCA 2634498 Query 148072 CCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCG 148131 || |||| || ||| ||||| | || || ||||||||| |||||||||||| Sbjct 2634497 GCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCG 2634438 Query 148132 TTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG--CGTTCCCGCCG-AG 148188 | || | | |||| || || ||| ||||| ||| | ||||| || | Sbjct 2634437 TCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGG---CCGGTTGGTCCCGGCGTTG 2634381 Query 148189 AAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATA 148248 || ||||| ||| ||||| || ||| | || | || | | || ||||| || Sbjct 2634380 AAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATG 2634321 Query 148249 GCGTCTTCGATGTCGTCG-CCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGG 148307 || | || ||||| ||| ||||| || || | || || | ||||||||||||||| || Sbjct 2634320 GCAGCGTCAATGTC-TCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGG 2634262 Query 148308 TCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACC 148367 || ||||| |||| ||||||||| || || || || || || ||| |||| Sbjct 2634261 CCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACC 2634202 Query 148368 AAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGG 148405 ||| | ||||| |||||| |||||| ||||| Sbjct 2634201 GAAGAAGTTGTAGGAGAAATCTCTGTCGTAAATGATGG 2634164 >seq292 Length=796020 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| || ||| || |||||| ||||||||||| | | Sbjct 171432 GACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 171373 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 ||||||| | ||| || || ||||| |||||||||||||| ||| ||| |||| Sbjct 171372 AAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTCACG 171313 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | |||||||| || | || | || || ||||| |||||||| Sbjct 171312 TTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTCCCAGTGAGAGTTTTC 171253 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 171252 ACGAAAATCTGCAT 171239 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| || ||| || |||||| |||||||| || | | Sbjct 171660 GACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCA 171601 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || || ||||| |||||||||||||| ||| ||| |||| Sbjct 171600 AAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTCACG 171541 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | |||||||| || | || | || || ||||| || ||||| Sbjct 171540 TTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTC 171481 Query 132110 ATGAAAATCTGCATGACT 132127 | ||||||||||||| || Sbjct 171480 ACGAAAATCTGCATGCCT 171463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476587458804600