Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq107 100 9e-18 seq233 98.7 3e-17 seq148 98.7 3e-17 seq6 98.7 3e-17 >seq107 Length=2009684 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 547205 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 547146 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 547145 CCCGGGTTTCGGC 547133 >seq233 Length=1037213 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 154605 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 154546 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 154545 CCGGGTTTCGGC 154534 >seq148 Length=1605941 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 359088 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 359147 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 359148 CCGGGTTTCGGC 359159 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 470444 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 470503 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 470504 CCGGGTTTCGGC 470515 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 483712 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 483771 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 483772 CCGGGTTTCGGC 483783 >seq6 Length=6332452 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2184106 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2184047 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2184046 CCGGGTTTCGGC 2184035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848909180325