Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq15 114 1e-20
>seq15
Length=4650977
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| || | || ||| || | || ||||||||||| || |||||
Sbjct 569649 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAG 569708
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | || | || |||||| ||| |||||| ||| | | |
Sbjct 569709 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTAACATTC 569768
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | |||||||| | ||||| ||||| || || | |||||||||
Sbjct 569769 TCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACA 569828
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 569829 AAGATCTGCAT 569839
Score = 109 bits (120), Expect = 5e-19
Identities = 141/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| ||||| || ||||| || | || ||| || | || ||||||||||| || |||||
Sbjct 564611 TCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAG 564670
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | || | || |||||| ||| ||| ||| |||| |||
Sbjct 564671 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGAT-TTTGGCTTTGACGTT 564729
Query 35666 -GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | |||||||||| ||||| ||||| || || | || || ||
Sbjct 564730 CTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGAC 564789
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 564790 AAAGATCTGCAT 564801
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| || | || ||||||||||| || |||||
Sbjct 564382 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAA 564441
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || ||||||||| | || | || |||||| ||| |||||| ||| | |
Sbjct 564442 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 564501
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||||| ||||| || || || || | || || ||
Sbjct 564502 CTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 564561
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 564562 GAAGATCTGCAT 564573
Score = 102 bits (112), Expect = 7e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| |||| || ||| || | || ||||||||||| || |||||
Sbjct 564155 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 564214
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | || | || |||||| ||| ||| || ||| | |
Sbjct 564215 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTC 564274
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | |||||||| | |||||| |||| ||||| || || || || | || || ||
Sbjct 564275 TCAATGGTGTCGCTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 564334
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 564335 AAGATCTGCAT 564345
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 35555 ATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGC 35614
|||||||| || | || ||| || | || ||||||||||| || ||||| |||| || |
Sbjct 569202 ATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTC 569261
Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGT 35673
|||||||| | || | || |||||| ||| ||| ||| |||| ||| | | ||
Sbjct 569262 TGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGAT-TTTGGCTTTGACGTTCTCAATGGT 569320
Query 35674 GTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTG 35733
||| || | || || |||| ||||| || || || || | || || || || |||||
Sbjct 569321 GTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 569380
Query 35734 CAT 35736
|||
Sbjct 569381 CAT 569383
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| || | || ||| || | || ||||||||||| || |||||
Sbjct 569421 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 569480
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || ||||||||| | || | || |||||| ||| ||| || ||| | |
Sbjct 569481 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTC 569540
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | ||| |||| | ||||| ||||| || || | || || |
Sbjct 569541 TCAATGGTGTCACTGGGCTCCCCCTCAAGGGTGATGGTTTTGCCGGTGAGGGTCTTGCCG 569600
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 569601 AAGATCTGCAT 569611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450771144843800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |