Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq32 394 1e-104 seq146 98.7 1e-15 >seq32 Length=3524602 Score = 394 bits (436), Expect = 1e-104 Identities = 1267/1953 (65%), Gaps = 25/1953 (1%) Strand=Plus/Minus Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712 ||||| ||||| || ||||||| | |||||| | | | ||||| || || || Sbjct 2635733 TTCTTCATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTG 2635674 Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772 || || || || || || || | ||| || || ||||| || || ||||| || | || Sbjct 2635673 ACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCG 2635614 Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAAT 68832 | || || || || ||||| || || || || || || || ||||| || |||| || Sbjct 2635613 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGC 2635554 Query 68833 AAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGA 68892 | || || || | || ||| | ||| || || || || | ||||| ||||| || Sbjct 2635553 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 2635494 Query 68893 TCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCA 68952 || | || | ||| | ||||| || || || || ||||| | || || Sbjct 2635493 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGCGAGCCC 2635434 Query 68953 TTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCG 69012 | ||||| || || || || || | | || ||||| || || ||||| | || || Sbjct 2635433 TCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCG 2635374 Query 69013 TAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGA 69072 | || || || ||||| |||| | ||||| || ||||| | || ||||| ||| Sbjct 2635373 TGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGGA 2635314 Query 69073 TAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGT 69132 | | | || || || ||||| |||| ||||| || || || ||||| || || || Sbjct 2635313 TGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGG 2635254 Query 69133 CTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTA 69192 | ||| || || | || ||||| || | || || ||||| || || || || || || Sbjct 2635253 CGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGTTG 2635194 Query 69193 AGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCA-TC 69251 || ||| || | ||| || ||| || || || || || |||| || Sbjct 2635193 AGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAA-GTCCGCTC 2635135 Query 69252 TA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGA 69308 | | || |||| || || || | || || || || || || || ||||| | Sbjct 2635134 TGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTT 2635075 Query 69309 ATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTG 69368 | | || | | | |||||| || || || || |||||||| || ||||| || || Sbjct 2635074 GCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTG 2635015 Query 69369 CTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAAT 69428 ||| || ||||| |||| || ||||||||||| || || | || || || ||||| | Sbjct 2635014 CTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGT 2634955 Query 69429 CTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT 69488 ||| || ||||| || | | ||| | | || || | || |||| || || Sbjct 2634954 CTGGGACTCGATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTC--ACCCTC 2634897 Query 69489 C--TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAAT 69546 | || || |||||| || || ||| ||||| || |||||||| || |||| Sbjct 2634896 CCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGC 2634837 Query 69547 CCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATA 69606 || ||||| || | ||||||||||| ||||| | | | || |||| ||||| Sbjct 2634836 CCGGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATG 2634777 Query 69607 AATAGATCGGGAATCCAAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCC 69665 || || || || ||||| | || || ||| || ||||||| ||| | || || ||||| Sbjct 2634776 AACAGGTCCGGGATCCACAAGGCGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTCCTTTCC 2634718 Query 69666 TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 69725 ||| || || || || || || || || | | || | ||||| ||||| || || || Sbjct 2634717 TGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACAT 2634658 Query 69726 CGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATA 69785 || | | | || |||| || || || ||||| || | ||| | || ||||| || || Sbjct 2634657 GGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTA 2634598 Query 69786 GACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCC 69845 |||||||||||||| | | || || || || || || || || | ||| || ||||| Sbjct 2634597 AACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCC 2634538 Query 69846 TCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGC 69905 | | || || || | | | || || || || || || || || || || Sbjct 2634537 CGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGC 2634478 Query 69906 ACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAA 69965 || | |||| ||||| || || || || ||||| || || ||||| | || || || Sbjct 2634477 GCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAA 2634418 Query 69966 ACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025 ||||| |||| || | | | || || || || || | || ||||| ||||| || Sbjct 2634417 GCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGT 2634358 Query 70026 GAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATG 70085 |||||| || || || || || ||||| || || || || | || || || | | || Sbjct 2634357 GAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTG 2634298 Query 70086 AATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTAT 70145 || || | || || | ||| | ||| ||||| || || || || ||| || || Sbjct 2634297 GATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGAT 2634238 Query 70146 TTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCT 70205 |||| |||||| || |||||||| || || || || ||||||| || || ||||| Sbjct 2634237 CTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTTGTAGGAGAAATCTCT 2634178 Query 70206 TTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATC---CATAAC 70262 |||||||| || ||||| || ||||| | || | || || || | | | Sbjct 2634177 GTCGTAAATGATGGAGGAATTGAGGCGGTCCTTGTTTTCCATGACGATGTCGAGCGTCTC 2634118 Query 70263 AGTAGGTGAGATAATCGGAGA---TCGTTTACCATTTTTAGGATTAACATAGTTGAATAA 70319 | ||||| || ||||| ||||| || ||| || || ||| ||| | Sbjct 2634117 CTT---GGAGATCATGGGAGAGTGCCGTTT---GTTCAGAGGGTTGACGTAGGCGAACAG 2634064 Query 70320 ATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTAT 70379 |||||||| || || || || | || || || |||||||| | || || | ||| || Sbjct 2634063 GTCTTCCATCACCTCGCTGAACACCTTCTTGGTCTCCTTGTGCAGGTTGGAGACGGCAAT 2634004 Query 70380 TCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGC 70439 || || || || || || ||||| || |||| || || || || || || ||||| Sbjct 2634003 CCTCGCGGCCAGGATGGCGTAGTCGGGGTGTTTGGTCGTCAGGGTGGCCGCGATCTCCGC 2633944 Query 70440 AGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCAT 70499 |||| ||| |||| || | || || || ||| | || | || || || || ||||| Sbjct 2633943 CGCTAGCGTGTCTAGCTCCACGGTGGTGACGCCGCTGTACAAGCCCTGGATCACCTTCAT 2633884 Query 70500 GGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCT-AATAC 70558 || || | ||||| | || || | |||||| || || || || |||| || | Sbjct 2633883 GGTGATCTGAGCTGGATCCACAAAGTCCGGGTTCAGGCCGTAGCA-AAGCTTCTGGATGC 2633825 Query 70559 GAGATGTAATTTTATCAAACATAACATTCTCCT 70591 | || || |||||||| ||||| || ||||| Sbjct 2633824 GGGAGGTGATTTTATCGAACATGACGCGCTCCT 2633792 >seq146 Length=1599760 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 69325 ATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG 69384 |||||||| || ||||| || | ||||| || |||||||||||||| || |||| || Sbjct 271742 ATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGTTGGTCTTCCTG 271801 Query 69385 TTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAAT 69443 || |||||||||||||| || || |||| ||||| || || |||| || ||||| || Sbjct 271802 TTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTGCGACTCGATGAT 271860 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || || || || | |||||||| |||||||||||||| || || |||||||| ||| Sbjct 273243 GTGCCGGCGTTGAACAGGGTAGGAGACGCGTGAGTGAACCACTTCTCTGAAAGCAGGTTG 273302 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 |||||||||| ||||| || || || | ||||| || | || || | ||||| | Sbjct 273303 TATGTTTCAACAGCTGCATCAATGTCTTCTTTGTGAATCCCGACTGCCACTCTCATCAGC 273362 Query 70111 ATATGCTGAGGTC 70123 || ||||| |||| Sbjct 273363 ATGTGCTGGGGTC 273375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686874583355400