Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq72 95.1 1e-14 seq481 82.4 6e-11 >seq72 Length=2559699 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 ||||| |||| || || ||| | |||||||| ||||| ||| | || || ||||| Sbjct 2421729 ATGGCGCTGCCCCCCTGCCATGCCCTCTGTCAGTTCTACGTCTGCGACGGGGAGCTGTCT 2421788 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 ||||| |||| || | || | |||||||| || || || || || ||||| || || Sbjct 2421789 TGTCAGCTGTACCAGCGCTCCGCCGACATGGGTCTGGGCGTGCCTTTCAACATCGCCAGC 2421848 Query 41169 TATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 || || || ||||| || |||||||||||| |||| Sbjct 2421849 TACGCACTTCTCACCTACATGATTGCACACATTAC 2421883 >seq481 Length=413523 Score = 82.4 bits (90), Expect = 6e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGAC 77370 |||||| || |||||||| | || || |||||||| |||| ||||| || |||||| Sbjct 88734 CCAGACCACGTCCAGCTCAGAGTTCAGCCGGTCCAGCGTCATGAAGTCTTCTTTGTTGGT 88793 Query 77371 AA-CTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAG 77429 | | |||| | | | | |||||||||||||||| |||||| |||| ||||| | | Sbjct 88794 GATCGGACCACCAGACTT-CAGCCTCCAGCCGTTCACTTTCCAGGTCTTCACCCAACTGG 88852 Query 77430 TCACACC 77436 ||||||| Sbjct 88853 TCACACC 88859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397436696679925