Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq32 109 5e-19
seq15 95.1 1e-14
seq146 82.4 6e-11
>seq32
Length=3524602
Score = 109 bits (120), Expect = 5e-19
Identities = 262/396 (66%), Gaps = 3/396 (1%)
Strand=Plus/Minus
Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661
|||||| |||||||||||||| | ||||| | ||| || |||| |||||| ||
Sbjct 2634834 GGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAA 2634775
Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721
|| ||||| | ||| || ||||| || || ||||| ||| | | ||| || | || |
Sbjct 2634774 CAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGT 2634715
Query 131722 AAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781
| || |||| | | ||||| || | ||| ||||| ||||||| |||| ||
Sbjct 2634714 GTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGC 2634655
Query 131782 CATTGCGCC---TTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838
| || || | | || ||||| || | || | ||| || |||||||||| ||
Sbjct 2634654 GAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAAC 2634595
Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898
| || ||| || |||| ||||||| ||| || ||||||| ||||||||| || |
Sbjct 2634594 TCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCCCGT 2634535
Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCA 131958
| || ||| | || | || || || || || | || || || || |||||
Sbjct 2634534 CGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCA 2634475
Query 131959 TTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994
| | || |||| ||||| ||||| | ||||||
Sbjct 2634474 CTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTC 2634439
>seq15
Length=4650977
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || |||||||| ||||||||||| || | |||| | ||||| ||||| || |||
Sbjct 564605 GTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 564664
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || || | ||| || || || || | ||||| ||||| ||| ||| |||
Sbjct 564665 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCTTTG 564724
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| ||| || || || || || || | |||||| || || ||
Sbjct 564725 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTC 564784
Query 27231 TTCACAAAGATTTGCAT 27247
|| |||||||| |||||
Sbjct 564785 TTGACAAAGATCTGCAT 564801
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || ||||| || || |||||||| || | |||| | ||||| ||||| || |||
Sbjct 569643 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 569702
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | || || | ||| || || || || | ||||| ||||| ||||||| ||
Sbjct 569703 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTA 569762
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||| ||| || || || || || || | |||||| || || |||
Sbjct 569763 ACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTGCCGGTGAGGGTT 569822
Query 27231 TTCACAAAGATTTGCAT 27247
||||||||||| |||||
Sbjct 569823 TTCACAAAGATCTGCAT 569839
>seq146
Length=1599760
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703
||| |||||||||||||| | || || | ||| || || | ||||| ||||| ||| |
Sbjct 272183 TTCCACTCGCTTCATAAAGAGGTCTGGAATCCACAAGGCAAAGAACAGGTCTCTGGCTCT 272242
Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763
| ||||||| ||||| | | || |||| | ||||| || || | ||| ||||||||
Sbjct 272243 CTGCTCTTCTTTACCCGTGTTCTTCTTCAGCTCCAAAAACTCAAACACGTCAGCATGCCA 272302
Query 131764 GGGTTCCAAATACAC 131778
|| |||| |||||
Sbjct 272303 CGGCTCCAGGTACAC 272317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424913762131320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |