Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq32 158 2e-33
seq146 91.5 2e-13
seq169 89.7 6e-13
seq22 84.2 3e-11
>seq32
Length=3524602
Score = 158 bits (174), Expect = 2e-33
Identities = 949/1495 (63%), Gaps = 50/1495 (3%)
Strand=Plus/Minus
Query 110614 CTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGAC 110673
|||||| |||| | ||| || || || | | ||||| |||| |||||| ||||||
Sbjct 2635731 CTTCATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGAC 2635672
Query 110674 AATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAA 110733
|| ||||| || | || || | ||||||||| | ||||| | || |
Sbjct 2635671 GATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGAT 2635612
Query 110734 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 110793
| | || || || |||| ||| || |||||||| || || ||||| || |||| || ||
Sbjct 2635611 GGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAG 2635552
Query 110794 ACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA- 110852
||||| | | || | | ||| ||||| || | | |||||| | |
Sbjct 2635551 GCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTC 2635492
Query 110853 GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC-CCCTTGG-GACGCGGGAGAACC 110910
| | || || || |||||||||| |||| || | ||||| |||| | ||| ||
Sbjct 2635491 GGTCGGCGTCTTCT-CCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGCGAG--CC 2635435
Query 110911 CTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGC 110970
||| | || || |||| || | || | || | ||| ||||| |||||||||| ||
Sbjct 2635434 CTCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGC 2635375
Query 110971 GTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGC 111030
||| || ||||| || ||||| | || | | || |||||| || || |
Sbjct 2635374 GTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGG 2635315
Query 111031 GTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 111090
| || || || || |||| || ||||| || || || | || || || |||||
Sbjct 2635314 ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTG 2635255
Query 111091 TCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGT 111149
||| | || ||| | | || || || || || |||| |||| |||| ||
Sbjct 2635254 GCGCTTGTTGGACGT-CTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGT 2635196
Query 111150 TTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAG 111209
| || ||||| | | ||| |||| || || | | || ||||| ||
Sbjct 2635195 TGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCG-- 2635138
Query 111210 TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269
|||| |||| ||| | |||||||| || |||| ||||| || ||| ||| |
Sbjct 2635137 -CTCTGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGT 2635079
Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329
|||| |||||||| | | ||||| || | |||| | || || || |||| |
Sbjct 2635078 CCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGT 2635019
Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389
||| ||||| |||||| ||||||| || |||||||||||||||||||||||||| || |
Sbjct 2635018 TCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTT 2634959
Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCC 111448
| ||||| || | || || || | ||| | | | ||| || || | || ||
Sbjct 2634958 CGGTCTGGGACTCGATGATGGCGTACCAGAGCTGCTGCGCCT-TCACCACCCTCTTCACC 2634900
Query 111449 CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGA 111507
| || ||| ||| || | |||||||| || |||||||| ||| | || |||
Sbjct 2634899 CTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCC-CAGCACTCGTC 2634841
Query 111508 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGC 111565
|| || || || | ||||| | | ||||| | || || ||| || | |
Sbjct 2634840 CAGCCCGGGACACTCGCTGGGACACATCAAGGACCA--GTCCTGGTTGCTCTCCACTCTC 2634783
Query 111566 TTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCG 111625
|||||||| ||||| || ||||||| || | || || ||||| | ||| ||
Sbjct 2634782 TTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCC 2634723
Query 111626 TCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 111684
| ||| ||| || | | ||| ||||| || | | || |||||| || || ||
Sbjct 2634722 TTTCCTGTGTT-CTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAG 2634664
Query 111685 ATAGACTGCGA------TAGATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTG 111737
|| | |||| | || ||| | | ||||| || | || ||||| || |
Sbjct 2634663 GTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCC----TGGTCGACGTAGCGAGCCG 2634608
Query 111738 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 111797
|| ||| | || | ||||| || | | || | || | || || || || ||
Sbjct 2634607 TGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAA 2634548
Query 111798 TACGAGATT------TATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCC 111851
| || || || || | || ||| | || || || ||||||||
Sbjct 2634547 T-GTAGCTTCCCGTCGATCGGAT-GCAGCTCACCG----CCACGCCGATCCCCCCAGCGG 2634494
Query 111852 ACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCT 111911
|||| || || |||| |||| | | || || | ||||| || | ||| ||| ||||
Sbjct 2634493 ACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCT 2634434
Query 111912 TGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC--TTGGTGTACCAGCATTGAAGAG 111969
| ||| || |||||||| ||||||| |||||| | ||| || || || ||||||||
Sbjct 2634433 TCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTG--GTCCCGGCGTTGAAGAG 2634376
Query 111970 GGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAG 112028
||| || | ||||| ||||| || | | |||| || ||| ||||| | | |||
Sbjct 2634375 GGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAG 2634317
Query 112029 AATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
||||||||| ||||||||| || | | |||| ||||| ||||| ||| ||
Sbjct 2634316 CGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGG 2634262
>seq146
Length=1599760
Score = 91.5 bits (100), Expect = 2e-13
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || |||||| || | || ||||| || | ||| ||| || || ||
Sbjct 271717 CTCATCTCTACTTGTGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCC 271776
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
|| ||| | ||||| ||||| ||||||| || ||||||||||||||||| ||||| ||
Sbjct 271777 CAGATTTTGCTGGTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACC 271836
Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
|||||| ||||| || | || || || | |||
Sbjct 271837 CGTCTCTGTCTGCGACTCGATGATGGCGTACCA 271869
>seq169
Length=1474717
Score = 89.7 bits (98), Expect = 6e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| ||||||||||||||||||||||||||||||||||| || || |||||| |||||
Sbjct 1315702 TACTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGAGAAATGTTCTCCATG 1315643
Query 122431 AAGTCAAATGGATTCTTCG 122449
||||| || || |||| ||
Sbjct 1315642 AAGTCGAACGGGTTCTCCG 1315624
>seq22
Length=4020106
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737
|||| || | | ||| ||||| || ||| || || ||||||||||| || | |||||
Sbjct 3875968 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 3875909
Query 122738 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786
||| ||| || ||||| |||||| || ||||||||||| ||||||||
Sbjct 3875908 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCAC 3875860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628000716156000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |