Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq32 183 4e-41 seq22 100 4e-16 >seq32 Length=3524602 Score = 183 bits (202), Expect = 4e-41 Identities = 890/1390 (64%), Gaps = 42/1390 (3%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| ||||| Sbjct 2635637 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 2635578 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || ||||||||||| |||| || |||||||| | | || | || || ||| Sbjct 2635577 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 2635518 Query 118302 TTGAG-AGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357 || || ||| ||| |||| | || | | |||| | || ||||| || |||| Sbjct 2635517 TTCAGCAGCTTCC-AGTCCCACAGGTCGGTCGGCGTCTTCTCC---CACATGTCGTACTG 2635462 Query 118358 GAGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415 |||||| || | |||| ||||| ||||| ||||||| || ||||| | | Sbjct 2635461 GAGGATGCCCTTACTGACG--GGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCG 2635404 Query 118416 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 || | |||| |||| ||||| ||||| ||||| || || || || || || | || Sbjct 2635403 GCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTG 2635344 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | || ||| ||| | || |||| |||| || || || |||| || ||| Sbjct 2635343 AGCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGA 2635284 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC--- 118592 || ||||| |||| || || || | || | | | || ||| || ||| || Sbjct 2635283 CCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCT---CGGCTTCGGGG 2635227 Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 || || || |||| | ||||| | | | || || ||||| || ||||| |||| Sbjct 2635226 ACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACG 2635167 Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 118712 ||||| | | | || ||| | || |||| |||| ||| | |||||| Sbjct 2635166 GAGGCCAGCTTCTTGAAGTCGAAAGTCCG---CTCTGGCGTGACGTACATGTTGAGGGCG 2635110 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || ||||| || || || | ||| ||||| |||||||| | | || ||| Sbjct 2635109 ATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTG 2635050 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 || | ||| | || |||||||||| ||||| || || ||| |||| || || Sbjct 2635049 CAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCG 2634990 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 |||||||| |||||||| |||||||| || || || ||||||| || || || | |||| Sbjct 2634989 TCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAG 2634930 Query 118893 ACAT-CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 | | | || || || | || | | ||| || | ||| || | |||||||| Sbjct 2634929 AGCTGCTGCGCCTTCACCACCCTC-TTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAG 2634871 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGA 119010 || ||||| || ||| | ||| ||||| || || ||||| || | | Sbjct 2634870 CTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCG-CTGGGACACATCA 2634812 Query 119011 GAGACCATTGACCACCCTCCTCA--ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 ||||| | || | ||| || | ||||||||| ||||| |||||||| | || Sbjct 2634811 AGGACCAGT--CCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGC 2634754 Query 119069 CGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127 |||| || || | | | ||| || | | || || || || ||||| | Sbjct 2634753 GTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGA 2634695 Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGA 119183 |||| | | || |||||||||||||||||||| |||| | ||| || | Sbjct 2634694 AGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGT 2634635 Query 119184 CGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATA 119243 | || |||||| || || | || ||| ||| | || | ||||| || | | Sbjct 2634634 TG-CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAAT 2634576 Query 119244 CCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGC--TCTGACATCGTGGA 119301 || | ||| | ||| || || || ||| || ||| | | || || | | Sbjct 2634575 CCGTTGGAGTTGCCGTTGGTGCCGGCAATGT-AG-CTTCCCGTCGATCGGATGCAGCTCA 2634518 Query 119302 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 119361 || || || ||||| || |||| || || ||||||||| | | || || ||| Sbjct 2634517 CCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGT 2634458 Query 119362 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421 |||| || ||||| ||| |||| | | || ||||||||||| |||| || |||| Sbjct 2634457 AGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCC 2634398 Query 119422 TGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATC 119480 | || || ||||||||||| || || | |||||| ||||| || | | |||| Sbjct 2634397 GGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGG 2634339 Query 119481 TTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGC 119540 || ||||||||| | | | ||| ||||||| |||||| || || | ||| |||| | Sbjct 2634338 AGGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTC 2634279 Query 119541 ATAAACATGT 119550 || | ||||| Sbjct 2634278 ATGAGCATGT 2634269 >seq22 Length=4020106 Score = 100 bits (110), Expect = 4e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 ||||||| | | |||||||| || ||| || || ||||||||||| || | ||||| Sbjct 3875968 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 3875909 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| |||| | || ||| |||||||| |||||||||||||||||||| ||||| | Sbjct 3875908 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 3875849 Query 130155 CAAAGAGACGCTC 130167 | | |||||||| Sbjct 3875848 CCACAAGACGCTC 3875836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618404394196600