Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq32 183 4e-41
seq22 100 4e-16
>seq32
Length=3524602
Score = 183 bits (202), Expect = 4e-41
Identities = 890/1390 (64%), Gaps = 42/1390 (3%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| |||||
Sbjct 2635637 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 2635578
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| ||||||||||| |||| || |||||||| | | || | || || |||
Sbjct 2635577 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 2635518
Query 118302 TTGAG-AGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357
|| || ||| ||| |||| | || | | |||| | || ||||| || ||||
Sbjct 2635517 TTCAGCAGCTTCC-AGTCCCACAGGTCGGTCGGCGTCTTCTCC---CACATGTCGTACTG 2635462
Query 118358 GAGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415
|||||| || | |||| ||||| ||||| ||||||| || ||||| | |
Sbjct 2635461 GAGGATGCCCTTACTGACG--GGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCG 2635404
Query 118416 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475
|| | |||| |||| ||||| ||||| ||||| || || || || || || | ||
Sbjct 2635403 GCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTG 2635344
Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535
| || ||| ||| | || |||| |||| || || || |||| || |||
Sbjct 2635343 AGCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGA 2635284
Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC--- 118592
|| ||||| |||| || || || | || | | | || ||| || ||| ||
Sbjct 2635283 CCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCT---CGGCTTCGGGG 2635227
Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652
|| || || |||| | ||||| | | | || || ||||| || ||||| ||||
Sbjct 2635226 ACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACG 2635167
Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 118712
||||| | | | || ||| | || |||| |||| ||| | ||||||
Sbjct 2635166 GAGGCCAGCTTCTTGAAGTCGAAAGTCCG---CTCTGGCGTGACGTACATGTTGAGGGCG 2635110
Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772
|| || ||||| || || || | ||| ||||| |||||||| | | || |||
Sbjct 2635109 ATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTG 2635050
Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832
|| | ||| | || |||||||||| ||||| || || ||| |||| || ||
Sbjct 2635049 CAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCG 2634990
Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892
|||||||| |||||||| |||||||| || || || ||||||| || || || | ||||
Sbjct 2634989 TCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAG 2634930
Query 118893 ACAT-CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951
| | | || || || | || | | ||| || | ||| || | ||||||||
Sbjct 2634929 AGCTGCTGCGCCTTCACCACCCTC-TTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAG 2634871
Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGA 119010
|| ||||| || ||| | ||| ||||| || || ||||| || | |
Sbjct 2634870 CTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCG-CTGGGACACATCA 2634812
Query 119011 GAGACCATTGACCACCCTCCTCA--ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
||||| | || | ||| || | ||||||||| ||||| |||||||| | ||
Sbjct 2634811 AGGACCAGT--CCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGC 2634754
Query 119069 CGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127
|||| || || | | | ||| || | | || || || || ||||| |
Sbjct 2634753 GTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGA 2634695
Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGA 119183
|||| | | || |||||||||||||||||||| |||| | ||| || |
Sbjct 2634694 AGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGT 2634635
Query 119184 CGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATA 119243
| || |||||| || || | || ||| ||| | || | ||||| || | |
Sbjct 2634634 TG-CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAAT 2634576
Query 119244 CCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGC--TCTGACATCGTGGA 119301
|| | ||| | ||| || || || ||| || ||| | | || || | |
Sbjct 2634575 CCGTTGGAGTTGCCGTTGGTGCCGGCAATGT-AG-CTTCCCGTCGATCGGATGCAGCTCA 2634518
Query 119302 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 119361
|| || || ||||| || |||| || || ||||||||| | | || || |||
Sbjct 2634517 CCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGT 2634458
Query 119362 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421
|||| || ||||| ||| |||| | | || ||||||||||| |||| || ||||
Sbjct 2634457 AGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCC 2634398
Query 119422 TGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATC 119480
| || || ||||||||||| || || | |||||| ||||| || | | ||||
Sbjct 2634397 GGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGG 2634339
Query 119481 TTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGC 119540
|| ||||||||| | | | ||| ||||||| |||||| || || | ||| |||| |
Sbjct 2634338 AGGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTC 2634279
Query 119541 ATAAACATGT 119550
|| | |||||
Sbjct 2634278 ATGAGCATGT 2634269
>seq22
Length=4020106
Score = 100 bits (110), Expect = 4e-16
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
||||||| | | |||||||| || ||| || || ||||||||||| || | |||||
Sbjct 3875968 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 3875909
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154
||| |||| | || ||| |||||||| |||||||||||||||||||| ||||| |
Sbjct 3875908 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 3875849
Query 130155 CAAAGAGACGCTC 130167
| | ||||||||
Sbjct 3875848 CCACAAGACGCTC 3875836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618404394196600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |