Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq32 459 3e-124
seq22 104 3e-17
seq146 98.7 1e-15
seq169 93.3 5e-14
>seq32
Length=3524602
Score = 459 bits (508), Expect = 3e-124
Identities = 989/1455 (68%), Gaps = 43/1455 (3%)
Strand=Plus/Minus
Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566
|||||| |||| ||| || ||| |||||||||| | ||||||| ||||| | |||
Sbjct 2635665 GAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTC 2635606
Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626
|||||| |||| |||||||||||| || || || |||||||| || | ||| || ||
Sbjct 2635605 GTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTT 2635546
Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGC 78680
|| | || || | ||||| |||| || | |||||| | || |||
Sbjct 2635545 CCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGG 2635486
Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCT--CGGACGCCGGCGACCCCTTGAAC 78738
|| || |||||||||| || ||||| |||| | |||| ||||| |||| | |
Sbjct 2635485 CGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACG--GGCGAGCCCTCGTAT 2635428
Query 78739 GTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT---GACTCGAGCAGGGCCGCGTGG 78795
|||||||| | || ||| |||||||||||| | ||| |||||| ||||||
Sbjct 2635427 GTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTC---CAGGGCGGCGTGG 2635371
Query 78796 TACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT--GGTCTCGTCGAACGAAA 78853
|| | | ||||||||| |||||||| || | ||| || || ||||||| |
Sbjct 2635370 TAGATGGTCTCGAAGATCTGGATGTTGAGCA-GCTGGGCTTCGGGGCTT-TCGAACGGAT 2635313
Query 78854 GGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGC 78913
| | | || |||||| |||||||||| |||||||||||||| ||||||| | |||||
Sbjct 2635312 GTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGC 2635253
Query 78914 GCATGTTGCTCTT-TCGGGCCGCCTCGGT---CGGGTAAAAGTTCCGATCGATGACGCGG 78969
|| ||||| | | |||| | |||| |||||| | || ||||||| |
Sbjct 2635252 GCTTGTTGGACGTCTCGG----CTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTTG 2635197
Query 78970 TTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAAT---GA 79026
|| ||||| | || ||| || || | || || ||| || ||| |
Sbjct 2635196 TTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGC 2635137
Query 79027 TTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCC 79086
| | ||| | | | ||| | || ||||||||||| |||||| |||||||
Sbjct 2635136 TCTGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCC 2635077
Query 79087 GGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTC 79146
||| | ||| | | |||||||| | || | ||||||||||| | ||||
Sbjct 2635076 TTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTC 2635017
Query 79147 TTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCA 79206
| ||||||||||||| ||| || |||||||||||| |||||| ||||||||||| ||
Sbjct 2635016 TGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCG 2634957
Query 79207 ACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGA 79266
||| || || | | ||| ||||| | | | ||| || ||| |||| |||
Sbjct 2634956 GTCTGGGACTCGATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTT-CACCCT 2634898
Query 79267 CCCTGTGCGACGTACGTCCG--GTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCA 79324
|||| | | | | || | ||| | || | ||| |||| || || ||| ||
Sbjct 2634897 CCCT-TCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCA 2634839
Query 79325 GGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCA 79384
| || || |||||| || ||||||| | |||||||| || |||| || ||| ||
Sbjct 2634838 GCCCGGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCA 2634779
Query 79385 TGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGC 79444
|||| |||||||||||||||| ||| ||| ||||| | | | | |||||| | |
Sbjct 2634778 TGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTC 2634719
Query 79445 CCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGA 79504
| |||| |||||| || ||||| | | |||| ||||||||| ||||| || |
Sbjct 2634718 CTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACA 2634659
Query 79505 TGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGA 79564
||||||| | || | |||| ||||||||||| |||||| || ||||||||||||
Sbjct 2634658 TGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGT 2634599
Query 79565 AAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGAT-TCGTGTA 79623
|||||| ||||| || || | |||| || | |||||| || ||| || | | |
Sbjct 2634598 AAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTC 2634539
Query 79624 CCGCTCGCCCGAATGTTCGAGCAGTG-GATTCCGATGCCCCCGGACCACTTGGAGATGTG 79682
||| ||| || ||| | || | | ||||| ||||| | ||||||| ||| |
Sbjct 2634538 CCG-TCGATCGGATG-CAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAG 2634481
Query 79683 CGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAG 79742
|||||||| ||| || || ||||||||||| ||||| |||||||||||| | || |||
Sbjct 2634480 CGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAG 2634421
Query 79743 GAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTG 79802
||||||||| |||| ||| || ||| || |||||||||||||||||||| | |||||
Sbjct 2634420 GAAGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTG 2634361
Query 79803 CGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC-GCGCGGGAGGTCGTCG- 79860
||||| |||| | || || | ||| ||||| || | ||| | ||| |||
Sbjct 2634360 GGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCG-TCAATGTC-TCGC 2634303
Query 79861 CCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTCGCCGACATTCAGG 79920
|||||||| || |||| || | ||||| | || ||| ||| |||| | || ||| |
Sbjct 2634302 CCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCG 2634243
Query 79921 TAGCCCTTCTGCAGG 79935
| | |||| |||||
Sbjct 2634242 TTGATCTTCAGCAGG 2634228
Score = 345 bits (382), Expect = 5e-90
Identities = 880/1326 (66%), Gaps = 31/1326 (2%)
Strand=Plus/Plus
Query 19165 CGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAA 19224
|||||| ||| |||| || |||||| ||||| ||||| | |||||||| |||||
Sbjct 2634324 CGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACGCCTCTCCGACCCTCTTCAA 2634383
Query 19225 CGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAG 19284
|||||| || ||| |||||| |||| ||||| ||||| | | |||||||| |||||
Sbjct 2634384 CGCCGGGACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGGACGACAG 2634443
Query 19285 CATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGG 19344
||| || ||||||||||| || || ||| ||||||||| ||| ||||||| | |||||
Sbjct 2634444 CATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCTGGGGG 2634503
Query 19345 TATCGG-GATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACG 19403
||||| | | || | ||||| |||| || | || || || ||||
Sbjct 2634504 GATCGGCGTGGCGGTGAGC-TGCATCCGATCGACGGGAAGCTACATTGCCGGCACCAACG 2634562
Query 19404 GAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCA 19463
| || |||| | ||||| ||||| | || | |||||||||||| | ||||||
Sbjct 2634563 GCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCTCGCTACGTCG 2634622
Query 19464 ACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGG 19523
||||||| ||| ||| | || | |||||||| ||||| || || |||||| |
Sbjct 2634623 ACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAACCGTGGCACTTCG 2634682
Query 19524 ACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCG 19583
|||| | || ||||| || ||| |||| || | |||||| | | | |
Sbjct 2634683 ACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGAGCCAGAG 2634742
Query 19584 ACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAG 19643
|||| ||| ||||||||||| |||||||| |||||| ||| || |||| || | |
Sbjct 2634743 ACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAGAGAGTGGAGAGCAACCAGG 2634802
Query 19644 AATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGT 19703
| ||| | ||||||| || ||| || || || || ||| || || |||| ||
Sbjct 2634803 ACTGGTCCTTGATGTGTCCCAGCGAGTGTCCCGGGCTGGACGAGTGCTGGGGAGAGGAGT 2634862
Query 19704 TCAATGAGTTGT--ACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761
|| | || | | ||| || | | || | || || | |||| |||||| |||
Sbjct 2634863 TCGAGAAGCTCTACACCAGATATGAGAAG--GAAGGGAGGGTGAAGAGGGTGGTGAAGGC 2634920
Query 19762 CCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTG 19821
| | | ||||| || | || || | |||| ||| ||||| || || ||||||
Sbjct 2634921 GCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCGAAACCGGGACGCCCTACATGCT 2634980
Query 19822 CTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTC 19881
|||||||||||| ||| ||| || ||| ||||| | ||| | ||||| |
Sbjct 2634981 CTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAG 2635040
Query 19882 CAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCT 19941
|||||| || || || | ||||| ||| ||||||| ||||| || || ||
Sbjct 2635041 CAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGGACGAGGTGGCCGTCTGCAACCT 2635100
Query 19942 GGCGTCCCTGTGCCTGCCGACTTTCGTCAAG-----GCCTCCTCCTTCGACTTTGCCAAA 19996
||| ||| | ||| | | ||||| | || || |||||||| ||
Sbjct 2635101 GGCCTCCATCGCCCTCAACATGTACGTCACGCCAGAGCGGACT--TTCGACTTCAAGAAG 2635158
Query 19997 TTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTT 20056
|| | || ||| ||| || | || || || ||||||| || |
Sbjct 2635159 CTGGCCTCCGTCACCAAGGTAATCGTGAAAAACCTCAACAAGATCATCGACATCAATTAC 2635218
Query 20057 TACCCG---ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGC 20113
|||||| |||| || | | | ||| || | ||||||| ||||||||| |||||||
Sbjct 2635219 TACCCGGTCCCCGAAGCCGAG---ACGTCCAACAAGCGCCACAGGCCGATCGGGATCGGC 2635275
Query 20114 GTCCAGGGCCTGGCCGACGTTTTCATGATGCT-CGGCCTCTCATTCGACGATCCCAAGGC 20172
|||||||| |||||||| | ||||| || | || | || | ||||| ||| | ||
Sbjct 2635276 GTCCAGGGTCTGGCCGATGCCTTCATCCTGATGCGACATC-CGTTCGAAAGCCCCGAAGC 2635334
Query 20173 GCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTG 20232
| |||||||| ||||||||| || | |||||||| ||||| || ||
Sbjct 2635335 CCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACCACGCCGCCCTGGAGGCCAGCTG 2635394
Query 20233 CGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCG--AG 20290
|||||||||| |||| |||||| |||||||| | | |||| ||||| |||| | ||
Sbjct 2635395 CGAACTCGCCGCAGAGCTCGGCCCCTACGAGACATACGAGGGCTCGCC--CGTCAGTAAG 2635452
Query 20291 GGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC-----GC-C 20344
|| ||||||||| |||||||||| || || || | ||| | ||
Sbjct 2635453 GGCATCCTCCAGTACGACATGTGGGAGAAGACGCCGACCGACCTGTGGGACTGGAAGCTG 2635512
Query 20345 CTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCG 20404
|| |||| ||||| | ||||| | | ||| |||| | |||||||||||
Sbjct 2635513 CTGAAGGAGAAGATCGCCAAACACGGCGTGAGGAACAGCCTGCTGCTGGCGCCCATGCCC 2635572
Query 20405 ACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAAC 20464
|| || || |||||||||||| |||| ||||||||| | ||||| ||||||| | ||||
Sbjct 2635573 ACGGCGTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCGTACACCAGCAAC 2635632
Query 20465 ATCTAC 20470
||||||
Sbjct 2635633 ATCTAC 2635638
>seq22
Length=4020106
Score = 104 bits (114), Expect = 3e-17
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041
||||| | ||||| ||| ||||| || ||||||||||| ||||| ||| ||||||
Sbjct 3875839 CGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATCTTCTTCTCAGGCTCATTCGCTGCTATC 3875898
Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101
| |||||| || ||| | ||||||||||| ||||| | | ||||||||| || ||| |
Sbjct 3875899 TACTGGCTGAAGAAGAGAGGCCTCATGCCAGGCCTTACCTACTCCAACGAACTCATTAGC 3875958
Query 60102 CGGGACGAGG 60111
|||||||||
Sbjct 3875959 AGGGACGAGG 3875968
>seq146
Length=1599760
Score = 98.7 bits (108), Expect = 1e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 79099 TCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTC 79158
|||| ||| |||||||| | ||| |||||||||||||| | || | ||||||| ||
Sbjct 271736 TCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGTTGGTC 271795
Query 79159 TTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTC 79205
||| ||| ||||||||||||||| |||||||||||| || |||||
Sbjct 271796 TTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTCTC 271842
>seq169
Length=1474717
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60345 AACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAG 60404
||||| ||||||| ||||||| ||| || |||| ||||||||||||||||||||||||
Sbjct 1315629 AACCCGTTCGACTTCATGGAGAACATTTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAG 1315688
Query 60405 CGGGTCGGGGATTA 60418
||||||||||| ||
Sbjct 1315689 CGGGTCGGGGAGTA 1315702
Score = 91.5 bits (100), Expect = 2e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061
|||||| ||||||||||||||||| |||||| || || |||||||| || ||| | ||
Sbjct 1314742 CGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCCGCCATCTTCTGGCTGAAGAAGAGAGG 1314801
Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111
||| ||||| ||||| | ||| ||||||||| || || |||||||
Sbjct 1314802 CCTGATGCCTGGCCTAACCTTCAGCAACGAGCTCATCAGTCGAGACGAGG 1314851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548497476608400
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