Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq82 93.3 6e-14 seq950 87.8 2e-12 >seq82 Length=2326230 Score = 93.3 bits (102), Expect = 6e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 13682 GGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTT 13741 ||| ||| | | |||||||| || ||||| || ||||||||| | ||||| |||||||| Sbjct 592334 GGAGGAGCTAAATTTTCCCATTGCATACTCCATGGTGATCCACGAGAAGATAGAGATGTT 592275 Query 13742 CGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCA 13792 || || ||||| | | || || || ||||||||| ||||||||||||| Sbjct 592274 TGAACGACTCCTACGATCTATTTATGCTCCGCAGAACATCTACTGCGTCCA 592224 >seq950 Length=51080 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 13905 AGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGG 13964 || ||| || |||||||||||| ||| |||||||||| | || ||||||||| Sbjct 21247 AGCCGCCTGAAGGCCGACCTCAACTGTTTGTCGGACCTTCTGACATCAGAGGTCAAGTGG 21188 Query 13965 AGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTG 14024 | |||| | ||||||| ||||| |||||||||||| ||| ||||| ||||| | ||| Sbjct 21187 AAGTACGTCATCAACCTTTGCGGCCAGGACTTCCCGCTGAAGTCCAACATGGAGCTGGTG 21128 Query 14025 CGGGCGCTGAAGG 14037 | ||||| || Sbjct 21127 TCAGAGCTGAGGG 21115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658706386553600