Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq292 84.2 2e-11 >seq292 Length=796020 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| || | ||| | ||||| || || ||| ||| || || || || || || | Sbjct 171693 CCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAC 171634 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||||||||| ||||| || || | ||||||||| | || Sbjct 171633 AGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGGA 171574 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | || ||||| ||| ||| | | || || | || | | ||||| || | |||||| Sbjct 171573 ATGCCTTCTTTATCC-TGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCAC 171515 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | || || || || ||||| || || || ||||| Sbjct 171514 CTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 171467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429524738178305