Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq72 141 8e-29 seq442 93.3 3e-14 >seq72 Length=2559699 Score = 141 bits (156), Expect = 8e-29 Identities = 129/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || || | ||| || |||||||| ||||| || | ||||||||||||||| || ||| Sbjct 2421889 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 2421830 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || |||||||| | || | |||||| ||||| || || ||||| ||||||| Sbjct 2421829 ACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTCGCAG 2421770 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGA 29876 ||||| |||||||| | ||||||||| || || || ||||||| Sbjct 2421769 ACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCATGA 2421727 Score = 120 bits (132), Expect = 2e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||||||| ||||| || ||||| |||||||| || ||||| ||||| | |||| Sbjct 2420969 AAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCCCTCCTCCCTCTCTGTGAAG 2420910 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||||||| ||||| | ||| |||||||| ||||||||||| || || ||||| Sbjct 2420909 CCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATCCCAGATCTTCACTCCTTTCTCT 2420850 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || ||||| |||| ||||| || || Sbjct 2420849 GACAGCTCCTTGGCATTTGTTGATCC 2420824 >seq442 Length=505600 Score = 93.3 bits (102), Expect = 3e-14 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 ||||||||||||||| | ||| | |||| || |||| || || ||||| || ||||| || Sbjct 137247 CTCCCTGCTGAGGACGATGTTGATCCTGCCTTTCAGTGGCCTGTTCTTCTCTGGGATTGA 137306 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTC 114382 |||||| ||||| || ||||| |||||||| ||| Sbjct 137307 GAACCAGGTCTTCCTGCCCATGATCACCACATTC 137340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406143473795710