Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq151 306 3e-78 seq108 300 1e-76 seq1024 289 2e-73 seq72 150 1e-31 >seq151 Length=1555868 Score = 306 bits (338), Expect = 3e-78 Identities = 297/382 (78%), Gaps = 0/382 (0%) Strand=Plus/Plus Query 68936 AGTTCCAGAGTATCTGGCATTAGTGCGACAGAAGATGTCTGAATATAGTCACAACAGCTT 68995 || ||| || ||||||||| | ||| | || |||||||| |||| ||| | Sbjct 5338 AGATCCTGATTATCTGGCAGTGGTGTCAAAGTTTGTGTCTGAAAATAGATGCAAAGAAGT 5397 Query 68996 CCACCTACACAGTCCAGAGGGGTCCAAACTGACCATAGGACCCGTTGAGGACACAGAGTA 69055 || ||| ||||| ||| ||||||||||||| ||| | | |||||||||||||| Sbjct 5398 CCCTCTATGTTATCCAGTTGGGGCCAAACTGACCATTGGATCACTGGAGGACACAGAGTA 5457 Query 69056 TAAAGACAGGCCTGCAGTGGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGAC 69115 || ||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct 5458 CAAGGACAGGCCTGCAGTGGTGAACGGATGGGGAAAGTTTTATCTTCCCAAACTAACAAA 5517 Query 69116 GATGCAGGTCATCGGTTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGAT 69175 |||| |||| || || |||| | |||||| |||||| ||||||||||||||||||||| Sbjct 5518 GATGGAGGTTATTGGCTATGCAAAGGGAACAACATACCCATGTGACCAGCTTGTCCTGAT 5577 Query 69176 GACCTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAA 69235 |||||| ||||||||||||||||| |||| ||| ||||| ||||||||| |||||||| Sbjct 5578 GACCTGTGAGGACCAGAAGGTGTATGGCTTTGATGGAGATGAGCTGCATCTGGTGGCTTC 5637 Query 69236 CTGTCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCA 69295 || | | ||||||| ||| ||||||||| || |||||| |||||| ||||| || Sbjct 5638 CTCCCCGAGACAGATGGTCACAGAGGGAATAGCCGATTCTGCATCCCAGAGTTATTACCA 5697 Query 69296 TGGGGAGGCCTTCAAACATATG 69317 |||||||||||||||| | ||| Sbjct 5698 TGGGGAGGCCTTCAAAGACATG 5719 Score = 205 bits (226), Expect = 7e-48 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 69090 AAGTTTTATATCCCCACCGCCGTGACGATGCAGGTCATCGGTTATGTGACGGGAACTCCA 69149 ||||||||| | |||| | | |||| |||| || || || || ||||||| Sbjct 35983 AAGTTTTATCTTCCCAAAACAACAAAGATGGAGGTTATTGGCTACATGGAGGGAACTTAG 36042 Query 69150 TACCAATGTGACCAGCTTGTCCTGATGACCTGCGAGGACCAGAAGGTGTACGGCTATGAC 69209 |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 36043 TACCCATGTGACCAGCTTGTCCTGATGACCTGTGAGGACCAGAAGGTGTACGGCTTTGAT 36102 Query 69210 GGAGACGAGCTGCATGTGGTGGCTAACTGTCTGGATCAGATGGGGGAAGAAGGAATAGCC 69269 ||||| ||||||||| |||||||| | | |||||||||||| ||| ||||||||| Sbjct 36103 GGAGATGAGCTGCATCTGGTGGCTTTCAGCCTGGATCAGATGTTCACAGAGGGAATAGCC 36162 Query 69270 TATCCTGCATTCCAGAGCTATTATCATGGGGAGGCCTTCAAACATATG 69317 |||| ||| ||||||| | ||||| ||| |||||||||||| | ||| Sbjct 36163 GATCCAGCACTCCAGAGTTTTTATCGTGGTGAGGCCTTCAAAGACATG 36210 Score = 116 bits (128), Expect = 3e-21 Identities = 107/134 (80%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 69317 GACCAAGGAGGACTGGGAGAAGGTGAGGCAGAGCCCTGCGGGAAAAAGGTTGGATGAGGA 69376 |||||| |||||||||||| ||||| || ||||||| ||| | ||| |||||||||| Sbjct 36288 GACCAAAGAGGACTGGGAGGCGGTGAAGCTGAGCCCTATGGGGACGAGGCTGGATGAGGA 36347 Query 69377 GCATCATAAACTGGTGGTGTCTCAAAAATCTGCACTGCTGAGGAATCTCAGAATCAGCAG 69436 ||||| | ||||||||| |||| ||||| || | ||| |||||||| ||||| ||| Sbjct 36348 GCATCGTCAACTGGTGGCTTCTCGCAAATCCGCCATCCTGCAGAATCTCAAAATCATCAG 36407 Query 69437 ACAAA-ATAGAGGT 69449 ||||| | |||||| Sbjct 36408 ACAAAGACAGAGGT 36421 Score = 109 bits (120), Expect = 4e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 69317 GACCAAGGAGGACTGGGAGAAGGTGAGGCAGAGCCCTGCGGGAAAAAGGTTGGATGAGGA 69376 |||||| ||||||||| ||||||| |||| |||| | ||| ||||||||||| ||||| Sbjct 6344 GACCAAAGAGGACTGGTCGAAGGTGGAGCAGGGCCCCGTGGGGAAAAGGTTGGAAGAGGA 6403 Query 69377 GCATCATAAACTGGTGGTGTCTCAAAAATCTGCACTGCTGAGGAATCTCAGAATCAGCAG 69436 || || ||| ||||||| |||| ||| | | | |||| |||||||| ||||| ||| Sbjct 6404 GCTTCGTAATCTGGTGGCTTCTCGCAAACCCGATTTCCTGAAGAATCTCAAAATCATCAG 6463 Query 69437 ACAAA 69441 ||||| Sbjct 6464 ACAAA 6468 >seq108 Length=2040063 Score = 300 bits (332), Expect = 1e-76 Identities = 258/319 (81%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 68999 CCTACACAGTCCAGAGGGGTCCAAACTGACCATAGGACCCGTTGAGGACACAGAGTATAA 69058 ||||| || ||||| ||| | ||||||||||||||| | || ||||||||||| || Sbjct 21597 CCTACCTAGACCAGATGGGGCTGTACTGACCATAGGACCACTGGAAGACACAGAGTACAA 21538 Query 69059 AGACAGGCCTGCAGTGGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGAT 69118 ||||||||| ||||||||||||||||||| ||||||||| | |||| | | ||| Sbjct 21537 GGACAGGCCTACAGTGGTGAACGGATGGGGGAAGTTTTATCTTCCCAACATAACAAAGAT 21478 Query 69119 GCAGGTCATCGGTTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGAC 69178 | |||||||||| || ||| ||||||| | |||| |||||||||||||||| ||||||| Sbjct 21477 GAAGGTCATCGGCTACGTGGAGGGAACTTCGTACCCATGTGACCAGCTTGTCTTGATGAC 21418 Query 69179 CTGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTG 69238 ||| ||||| ||||||||||||||| ||| ||||| ||||||||| |||||||| | | Sbjct 21417 CTGTGAGGAAAAGAAGGTGTACGGCTTTGATGGAGAGGAGCTGCATCTGGTGGCTTTCAG 21358 Query 69239 TCTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGG 69298 |||||||||||| | | ||||||||| |||| ||| ||||||| ||||| |||| Sbjct 21357 CCTGGATCAGATGTTCACAAAGGGAATAGCCGATCCAGCACTCCAGAGTTATTACTATGG 21298 Query 69299 GGAGGCCTTCAAACATATG 69317 ||||||||||||| | ||| Sbjct 21297 GGAGGCCTTCAAAGACATG 21279 Score = 118 bits (130), Expect = 8e-22 Identities = 103/127 (81%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 69324 GAGGACTGGGAGAAGGTGAGGCAGAGCCCTGCGGGAAAAAGGTTGGATGAGGAGCATCAT 69383 |||||||||||| |||||| ||||||||||| ||| || | | || |||||||||||| | Sbjct 21193 GAGGACTGGGAGGAGGTGAAGCAGAGCCCTGTGGGGAAGATGCTGAATGAGGAGCATCGT 21134 Query 69384 AAACTGGTGGTGTCTCAAAAATCTGCACTGCTGAGGAATCTCAGAATCAGCAGAC-AAAA 69442 |||||||||| ||||| |||||||| | ||| || | || ||| || ||||| |||| Sbjct 21133 CAACTGGTGGTTTCTCACAAATCTGCTTTCCTGGAGATTTTCTGAACCATCAGACAAAAA 21074 Query 69443 TAGAGGT 69449 |||||| Sbjct 21073 CAGAGGT 21067 >seq1024 Length=60407 Score = 289 bits (320), Expect = 2e-73 Identities = 255/318 (80%), Gaps = 0/318 (0%) Strand=Plus/Plus Query 69000 CTACACAGTCCAGAGGGGTCCAAACTGACCATAGGACCCGTTGAGGACACAGAGTATAAA 69059 |||| | ||||| ||| ||| ||| |||| |||||| || |||||||||||||| || Sbjct 19801 CTACCTAATCCAGCTGGGGCCATACTAACCAAAGGACCAGTGGAGGACACAGAGTACAAG 19860 Query 69060 GACAGGCCTGCAGTGGTGAACGGATGGGGAAAGTTTTATATCCCCACCGCCGTGACGATG 69119 |||| |||| || ||| | |||||||||||||||||| | || | |||| |||| Sbjct 19861 GACAACCCTGAAGAAGTGGATGGATGGGGAAAGTTTTATCTTCCTGAAACGGTGAAGATG 19920 Query 69120 CAGGTCATCGGTTATGTGACGGGAACTCCATACCAATGTGACCAGCTTGTCCTGATGACC 69179 |||| || ||||||||| ||||| |||||| ||||||||||||||| |||||||| Sbjct 19921 AAGGTTATTGGTTATGTGCAAGGAACGCCATACTGTTGTGACCAGCTTGTCTTGATGACC 19980 Query 69180 TGCGAGGACCAGAAGGTGTACGGCTATGACGGAGACGAGCTGCATGTGGTGGCTAACTGT 69239 || |||||||||||||||||||| ||||| ||||||||||||||| |||||||||| | Sbjct 19981 TGTGAGGACCAGAAGGTGTACGGATATGATGGAGACGAGCTGCATTTGGTGGCTAAATCC 20040 Query 69240 CTGGATCAGATGGGGGAAGAAGGAATAGCCTATCCTGCATTCCAGAGCTATTATCATGGG 69299 || | ||| || || | ||||||||||||||||||||| |||| ||||| |||| Sbjct 20041 ATGCAACAGTTGCTTAAAAAGGGAATAGCCTATCCTGCATTCGAGAGTTATTACTATGGA 20100 Query 69300 GAGGCCTTCAAACATATG 69317 |||||||||||||| ||| Sbjct 20101 GAGGCCTTCAAACACATG 20118 Score = 89.7 bits (98), Expect = 4e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 69317 GACCAAGGAGGACTGGGAGAAGGTGAGGCAGAGCCCTGCGGGAAAAAGGTTGGATGAGGA 69376 |||| | |||| |||||||||||||| |||| | |||| ||| || ||||||||||| || Sbjct 20215 GACCGAAGAGGCCTGGGAGAAGGTGAAGCAGGGTCCTGTGGGGAAGAGGTTGGATGAAGA 20274 Query 69377 GCATCATAAACTGGTGG 69393 ||||| ||||||||||| Sbjct 20275 GCATCGTAAACTGGTGG 20291 >seq72 Length=2559699 Score = 150 bits (166), Expect = 1e-31 Identities = 134/168 (80%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||||| |||||||||| || || |||||||||||||| || ||||| |||||||| || Sbjct 2420991 CATGTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATC 2420932 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||||| ||||| | ||||||| ||||||| ||||| | ||| |||||||| || Sbjct 2420931 CCCCTCCTCCCTCTCTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATC 2420872 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 ||||||||| || || ||||| || ||||| |||| ||||| || || Sbjct 2420871 CCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGGCATTTGTTGATCC 2420824 Score = 132 bits (146), Expect = 4e-26 Identities = 127/163 (78%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || || | ||| || |||||||| ||||| || | ||||||||||||||| || || Sbjct 2421889 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 2421830 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||| | || | |||||| |||||||| || ||||| || |||| Sbjct 2421829 ACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTCGCAG 2421770 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGA 27370 ||||| |||||||| | ||| ||||| || || || ||||||| Sbjct 2421769 ACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCATGA 2421727 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 27380 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 27439 ||||||||||||||||||||| |||||| || | |||||| ||||| ||| ||||| || Sbjct 2421644 CTTTGGGGTTCCAGGCGCACATGATGATCCGTCGGTCTTCCGGGTTTTTCTTGATGGTGT 2421585 Query 27440 CCACGGCGTTTTGCAGCTGATCCACCCC 27467 | | | |||||| ||||| || || || Sbjct 2421584 CGATGATGTTTTGTAGCTGGTCGACACC 2421557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369489254074535