Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq32 394 1e-104 seq146 87.8 2e-12 >seq32 Length=3524602 Score = 394 bits (436), Expect = 1e-104 Identities = 1244/1915 (65%), Gaps = 21/1915 (1%) Strand=Plus/Minus Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165 ||||| ||||| || || || || || ||||| |||| || || || ||||| || || Sbjct 2635688 AGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTG 2635629 Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225 ||||| || | || | || || ||||| |||| || || || || || || || ||| Sbjct 2635628 CTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGC 2635569 Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285 || || |||| || | || || || | || ||| | ||| || || || || Sbjct 2635568 ATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGC 2635509 Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTA 77345 ||||| ||||| || || | || ||||| | ||||| || || || || ||| Sbjct 2635508 TTCCAGTCCCACAGGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTA 2635449 Query 77346 CTAGCATATGATCCATTATATGTTTCATAAGGTCCT---TCTGTTTCAGCTAGTTCACAA 77402 || | || || | ||||| || || || || |||| | || ||||| || Sbjct 2635448 CTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTG---CGGCGAGTTCGCAG 2635392 Query 77403 CTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCT 77462 || || |||| || ||| || || || ||||| |||| | ||||| || ||| Sbjct 2635391 CTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCT 2635332 Query 77463 TCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCA 77522 || || || ||||||| | | || || |||||||| || | ||||| || || Sbjct 2635331 TCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCG 2635272 Query 77523 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTA 77582 || || || || || || | ||| ||||| | | ||||| || | || || ||||| Sbjct 2635271 ATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAATTG 2635212 Query 77583 ATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGA 77642 ||||| || || || ||||| ||| | || | ||| || ||| || || Sbjct 2635211 ATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTG 2635152 Query 77643 AAATCAAATCTTCCATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAA 77699 || || || | | ||| | || ||||||| | || || || || || || || Sbjct 2635151 AAGTCGAAAGTCCGCTCTGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAG 2635092 Query 77700 ACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTG 77759 || || ||||| | | ||| || | | | ||| || || || || || |||||| Sbjct 2635091 ACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTG 2635032 Query 77760 ATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAAC 77819 || |||||||| || || ||||||||||| | ||||| | |||||| || || || | Sbjct 2635031 ATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAG 2634972 Query 77820 GGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTAT 77878 || ||||||||||| |||| || ||||| || | | ||||| | || || || | Sbjct 2634971 GGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGA-GCTGCTGCGCCTTCAC 2634913 Query 77879 CATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCC 77938 || || | || || | |||||| || || ||| || || || ||||| Sbjct 2634912 CACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCC 2634853 Query 77939 CCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTC 77998 ||| || |||| || || || || | || |||||||| |||||||| | Sbjct 2634852 CCAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCT 2634793 Query 77999 CTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCT 78058 || |||| ||||| || || || || ||||| | || || || |||| || ||| Sbjct 2634792 CTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCT 2634733 Query 78059 ATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCA 78118 || || || |||||||| ||||| || || || || || || | | || | ||||| Sbjct 2634732 CTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCA 2634673 Query 78119 TGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCT 78178 ||||| || || || || | | || |||| || || || ||||| || | || | Sbjct 2634672 CGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCG 2634613 Query 78179 GGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCC 78238 || ||||| || |||||||||| ||| || | | ||||| || | || || || || Sbjct 2634612 AGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCC 2634553 Query 78239 AGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCAT 78298 | ||| || ||||| | | || || || | | | || || || || || Sbjct 2634552 GGCAATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGA 2634493 Query 78299 CTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCAT 78358 ||| || || || ||||| | |||| || |||||||| || || || ||||| ||| | Sbjct 2634492 CTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTT 2634433 Query 78359 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGT 78418 |||| | || || || ||||| |||| || | | || || || || || | || Sbjct 2634432 CATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGT 2634373 Query 78419 CGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTC 78478 |||||| || || || ||||| || || || || || ||||| || || || || | || Sbjct 2634372 CGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTC 2634313 Query 78479 TATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAAC 78538 ||||| | || || || |||| || | ||| | ||| ||||| || | || | Sbjct 2634312 AATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGC 2634253 Query 78539 CGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 78598 | || || || |||| || ||| || |||| ||| || ||||| || |||| Sbjct 2634252 CACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTT 2634193 Query 78599 GTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAAC 78658 ||| || || ||||| |||||||| || ||||| || || |||| || | || Sbjct 2634192 GTAGGAGAAATCTCTGTCGTAAATGATGGAGGAATTGAGGCGGTCCTTGTTTTCCATGAC 2634133 Query 78659 AATATCCATGACAGTAGTTGAA-ATAATAGGAGATCGTACACCATTTTT---AGGATTAA 78714 || || | | | ||| | || || ||||| || | | || || ||| || | Sbjct 2634132 GATGTCGA-GCGTCTCCTTGGAGATCATGGGAGA--GTGC-CGTTTGTTCAGAGGGTTGA 2634077 Query 78715 CATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGAT 78774 | ||| || | |||||||| || || || || | || || || |||||||| || | Sbjct 2634076 CGTAGGCGAACAGGTCTTCCATCACCTCGCTGAACACCTTCTTGGTCTCCTTGTGCAGGT 2634017 Query 78775 TAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGG 78834 | || || || || || || || || || || || || || |||| || || |||| Sbjct 2634016 TGGAGACGGCAATCCTCGCGGCCAGGATGGCGTAGTCGGGGTGTTTGGTCGTCAGGGTGG 2633957 Query 78835 CTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTT 78894 | || || || ||||||| | |||| ||| | || ||||| || | || | || | Sbjct 2633956 CCGCGATCTCCGCCGCTAGCGTGTCTAGCTCCACGGTGGTGACGCCGCTGTACAAGCCCT 2633897 Query 78895 GAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATA 78954 | || || ||||||| ||| | | ||||| ||||| || | ||||| || || || | Sbjct 2633896 GGATCACCTTCATGGTGATCTGAGCTGGATCCACAAAGTCCGGGTTCAGGCCGTAGCA-A 2633838 Query 78955 ATTTTCTA-ATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 | |||| || || || ||||||||||| || || || ||||| || |||| Sbjct 2633837 AGCTTCTGGATGCGGGAGGTGATTTTATCGAACATGACGCGCTCCTGGCGCCCAT 2633783 >seq146 Length=1599760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || || || || | || ||||| || || || ||||| || || ||||| || ||| Sbjct 273243 GTGCCGGCGTTGAACAGGGTAGGAGACGCGTGAGTGAACCACTTCTCTGAAAGCAGGTTG 273302 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||| ||||| || ||||| || ||||| || || || || | ||||| | Sbjct 273303 TATGTTTCAACAGCTGCATCAATGTCTTCTTTGTGAATCCCGACTGCCACTCTCATCAGC 273362 Query 78519 ATATGCTGAGGTCTTTCA 78536 || ||||| ||||| ||| Sbjct 273363 ATGTGCTGGGGTCTCTCA 273380 Score = 86.0 bits (94), Expect = 9e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 ||||| || || ||||| || | ||||| |||||||||||||| |||||| |||| | Sbjct 271742 ATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGTTGGTCTTCCTG 271801 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852 ||||| | |||||| || || || |||| || || || || |||| || ||||| || Sbjct 271802 TTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTGCGACTCGATGATG 271861 Query 77853 GATTTCCAGA 77862 | | ||||| Sbjct 271862 GCGTACCAGA 271871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694634196810400