Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq32 383 2e-101 seq146 96.9 5e-15 >seq32 Length=3524602 Score = 383 bits (424), Expect = 2e-101 Identities = 1265/1955 (65%), Gaps = 29/1955 (1%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 ||||| ||||| || ||||||| | ||| || | | | ||||| ||||| || Sbjct 2635733 TTCTTCATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTG 2635674 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 || || || || ||||| |||| || || || ||||| || || ||||| || | || Sbjct 2635673 ACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCG 2635614 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 2635613 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGC 2635554 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | || || || | || ||| | ||| || || || || ||||| ||||| || Sbjct 2635553 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 2635494 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 || | || ||||| | ||||| || || || || || || | || || Sbjct 2635493 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGCGAGCCC 2635434 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 | ||||| ||||| | ||| || | | || |||||||| || ||||| | || || Sbjct 2635433 TCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCG 2635374 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 | || || || ||||| |||| | || || || ||||| | || || || ||| Sbjct 2635373 TGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGGA 2635314 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 | | | || || || ||||| || || ||||| || || || || || || || || Sbjct 2635313 TGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGG 2635254 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||| ||||| | || ||||| || | ||||| ||||| || || || || || ||| Sbjct 2635253 CGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGTTG 2635194 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255 || ||| | || | ||| || ||| || || || || || | | ||| Sbjct 2635193 AGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCT 2635134 Query 76256 ATC---ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT--TAG 76310 | || |||| || || || || || || || || || ||||| ||||| | | | Sbjct 2635133 GGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTG 2635074 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | ||| || | | | ||| ||||| || || || || ||||| || || || || | Sbjct 2635073 C--TGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCT 2635016 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 | ||||||||||| |||| || | |||||| || || | | || || || ||||| Sbjct 2635015 GCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGG 2634956 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTA--TC 76487 |||| || ||||| || | | ||||| | || || || | | || || Sbjct 2634955 TCTGGGACTCGATGATGGCGTACCAGA-GCTGCTGCGCCTTCACCACCCTCTTCACCCTC 2634897 Query 76488 GCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCA 76547 |||| ||| ||||| || || | | || || || |||||||| || |||| Sbjct 2634896 CCTTCCTTCT--CATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCA 2634839 Query 76548 AACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCA 76607 || ||||| || | ||||||||||| ||||| || | || || | |||| Sbjct 2634838 GCCCGGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCA 2634779 Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTC 76667 | || || || || ||||| | || || || |||| || ||| | || || |||| Sbjct 2634778 TGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTC 2634719 Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727 |||| ||||| || || || ||||| || | | || | ||||| ||||| || || | Sbjct 2634718 CTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACA 2634659 Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787 | || | | || |||| || || || ||||| || | || | || ||||| || | Sbjct 2634658 TGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGT 2634599 Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847 ||||||||| ||| || | | ||||| || | || || || || | ||| || |||| Sbjct 2634598 AAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTC 2634539 Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 | | || || || | | | ||| || || || || || || || || | Sbjct 2634538 CCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCG 2634479 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 | || | |||| ||||| |||||||| || || || || ||| ||||| | || || | Sbjct 2634478 CGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGA 2634419 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 | ||||| |||| || | | || || || || || | || ||||| || || | Sbjct 2634418 AGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGG 2634359 Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGAT 77087 ||||||| || || || || || ||||| || || || | || || || || | | Sbjct 2634358 TGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGT 2634299 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147 | || || || | || | ||| | ||| ||||| || || || | || || | Sbjct 2634298 GGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGA 2634239 Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 77207 | |||| || ||| || |||| ||| || ||||| || ||||||| || || |||| Sbjct 2634238 TCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTTGTAGGAGAAATCTC 2634179 Query 77208 TTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAG 77267 | |||||||| || ||||| || |||||| | || | || || || || | Sbjct 2634178 TGTCGTAAATGATGGAGGAATTGAGGCGGTCCTTGTTTTCCATGACGATGTC---GAGCG 2634122 Query 77268 T---GGTAGAAATAATTGGAGATCGTATTCCATTTTT----AGGATTAACATAGTTAAAT 77320 | | || || || ||||| | || ||| | ||| || || ||| || Sbjct 2634121 TCTCCTTGGAGATCATGGGAGA----GTGCCGTTTGTTCAGAGGGTTGACGTAGGCGAAC 2634066 Query 77321 AAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCT 77380 | ||||||||| || ||||| || | || || || |||||||| || || || ||||| Sbjct 2634065 AGGTCTTCCATCACCTCGCTGAACACCTTCTTGGTCTCCTTGTGCAGGTTGGAGACGGCA 2634006 Query 77381 ATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCT 77440 || || || || || || || ||||| || |||| || || |||||| || || || Sbjct 2634005 ATCCTCGCGGCCAGGATGGCGTAGTCGGGGTGTTTGGTCGTCAGGGTGGCCGCGATCTCC 2633946 Query 77441 GCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTC 77500 ||||||| || |||| || | || || || ||| | || | || || || || ||| Sbjct 2633945 GCCGCTAGCGTGTCTAGCTCCACGGTGGTGACGCCGCTGTACAAGCCCTGGATCACCTTC 2633886 Query 77501 ATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT-AAT 77559 |||| || | ||||| ||||| || | ||||| || || || || |||| || Sbjct 2633885 ATGGTGATCTGAGCTGGATCCACAAAGTCCGGGTTCAGGCCGTAGCA-AAGCTTCTGGAT 2633827 Query 77560 ACGAGATGTGATTTTATCAAACATGACATTCTCCT 77594 || || ||||||||||| |||||||| ||||| Sbjct 2633826 GCGGGAGGTGATTTTATCGAACATGACGCGCTCCT 2633792 >seq146 Length=1599760 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || || || |||| |||||||| || ||||||||||| || || ||||| || ||| Sbjct 273243 GTGCCGGCGTTGAACAGGGTAGGAGACGCGTGAGTGAACCACTTCTCTGAAAGCAGGTTG 273302 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||| | |||| || || || || ||||| || || || || | ||||| | Sbjct 273303 TATGTTTCAACAGCTGCATCAATGTCTTCTTTGTGAATCCCGACTGCCACTCTCATCAGC 273362 Query 77114 ATATGCTGAGGTC 77126 || ||||| |||| Sbjct 273363 ATGTGCTGGGGTC 273375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712898886955200