Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq15 140 2e-28
seq292 132 3e-26
>seq15
Length=4650977
Score = 140 bits (154), Expect = 2e-28
Identities = 159/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||||||||| ||| |||||| ||||||||||| || | || ||| | || |||
Sbjct 564365 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 564424
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||| | |||||| || | || | || ||||| |||
Sbjct 564425 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 564484
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| || | | |||| | ||||||||| || || ||||||| || || |||||
Sbjct 564485 ATCTT-GGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTT 564543
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||||||| |||||||| ||||||
Sbjct 564544 GCCGGTGAGGGTCTTGACGAAGATCTGCATG 564574
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | | || ||||| || || || || ||||||||||| ||||
Sbjct 564119 CCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAC 564178
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| ||||||||||||| | |||||| || | ||
Sbjct 564179 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 564238
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| || ||||| ||| || || || | | |||| | ||||||||| || ||||||
Sbjct 564239 ATGCCCTCCTTATCCTGGAT-TTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGTTCCAC 564297
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||| || || ||||| || ||||||||||| |||||||| ||||||
Sbjct 564298 TTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 564346
Score = 120 bits (132), Expect = 2e-22
Identities = 168/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | || ||||| || ||| || |||||||| ||||| ||
Sbjct 564571 CATGCCACCCCTCAGACGGAGGACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTC 564630
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || ||||||||||| ||||||||||||| | |||||| || |
Sbjct 564631 AGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGG 564690
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| || || |||| | |||| | ||||||||| || |
Sbjct 564691 GGGGATGCCCTCCTTATCCTGGAT-TTTGGCTTTGACGTTCTCAATGGTGTCGCTGGGCT 564749
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| || || || || || ||||||||||| || ||||| ||||||
Sbjct 564750 CCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCATG 564802
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||| || || ||||||||||| || | || ||| | || |||
Sbjct 569631 ACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 569690
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||| | |||||| || | || | || ||||| |||
Sbjct 569691 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 569750
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| || | || ||| | |||||||| || |||||||| | || || || ||
Sbjct 569751 ATCTT-GGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTT 569809
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||||||| ||||| ||||| |||||
Sbjct 569810 GCCGGTGAGGGTTTTCACAAAGATCTGCAT 569839
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||| || || ||||||||||| || | || ||| | || |||
Sbjct 569403 ACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 569462
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||||| | |||||| || | || | || ||||| |||
Sbjct 569463 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 569522
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|| || || | | |||| | |||||||| || ||| |||| | || || || ||
Sbjct 569523 AT-TTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCCCCTCAAGGGTGATGGTTTT 569581
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||||||| ||||||| ||||||
Sbjct 569582 GCCGGTGAGGGTCTTGCCGAAGATCTGCATG 569612
Score = 96.9 bits (106), Expect = 2e-15
Identities = 134/185 (72%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 44155 GATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACG 44214
||||||||| || | || ||| | || ||||||||||| || |||||||||| |
Sbjct 569201 GATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCT 569260
Query 44215 CTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGG 44273
|||||| || | || | || ||||| ||| || || |||| | |||| | ||||
Sbjct 569261 CTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTG-GCTTTGACGTTCTCAATGG 569319
Query 44274 TGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTT 44333
|||| || || || |||| || || ||||| || ||||||||||| |||||||| |
Sbjct 569320 TGTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAGATCT 569379
Query 44334 GCATG 44338
|||||
Sbjct 569380 GCATG 569384
>seq292
Length=796020
Score = 132 bits (146), Expect = 3e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 171469 CATGCCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 171410
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || |||||||| || || |||||||| | | |||||| || |
Sbjct 171409 CGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGG 171350
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | ||||| || ||| ||||| ||| | | |||| | |||||||| || |
Sbjct 171349 AGGAATGCCTTCTTTATCCTGAATCTT-TGCCTTCACGTTCTCAATGGTGTCACTGGGCT 171291
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| ||||| ||||| || ||||| || |||||||| || |||||
Sbjct 171290 CCACCTCCAGGGTAATGGTCTTCCCAGTGAGAGTTTTCACGAAAATCTGCAT 171239
Score = 132 bits (146), Expect = 3e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
||| || ||||| | | ||||||||| || ||| |||||| ||||||||||| || |
Sbjct 171694 TCCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 171635
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| ||| | || |||||||| || || |||||||||| | |||||| || | |||
Sbjct 171634 CAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGG 171575
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288
| ||||| || ||| ||||| ||| | | |||| | ||||| || || ||||
Sbjct 171574 AATGCCTTCTTTATCCTGAATCTT-TGCCTTCACGTTCTCAATGGTATCACTGGGCTCCA 171516
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||| || || ||||| || |||||||| |||||||| || ||||||
Sbjct 171515 CCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCATG 171466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359972916278745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |