Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq722 86.0 5e-12 >seq722 Length=280156 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 28952 TAGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAAC 29011 ||||||||| ||||| || ||| | ||||| | || || || ||||| ||| || Sbjct 191944 TAGTGTAAAGATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGT 192003 Query 29012 GGAACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCC 29071 ||| ||| || || | | | | ||| ||| ||| ||||||||||| | || Sbjct 192004 GGAGCCCAGTGATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCC 192063 Query 29072 CGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGC 29131 || || || || || |||||||| || ||||| ||||||||| | || || | Sbjct 192064 TCCTGACCAGCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTC 192123 Query 29132 CGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 || |||||||| |||||||| || || || ||| ||||| Sbjct 192124 GGACTACAATATCCAGAAGGAGTCCACCCTCCACCTGGTG 192163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428242096434140