Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq60 163 3e-35 >seq60 Length=641354 Score = 163 bits (180), Expect = 3e-35 Identities = 144/180 (80%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| ||||| | ||| || | ||||||||| || || | ||||||||| |||||||| Sbjct 476586 CTTGAGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAA 476527 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||| ||||| |||||||| | ||||||||||||||||| ||||| ||||||||| | Sbjct 476526 AGGCACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTC 476467 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 ||||||||||| || ||| |||||||| ||||| |||||| ||| ||||| || Sbjct 476466 GCAGACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCATGATGGGGAGGTCTGC 476407 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/156 (73%), Gaps = 8/156 (5%) Strand=Plus/Minus Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 |||| |||| | || || ||||||||||| ||||| || || || || ||||| ||||| Sbjct 475681 GTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCC 475622 Query 146094 GGGCTCCCTGTGCCCCAGCCCGGCCCGGG----CGAGGAAGTCCCGGGACCCGTTGGCGT 146149 |||||| | | | |||| || | |||||||| |||||||||||||| | Sbjct 475621 CTCCTCCCTCT----CTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCAT 475566 Query 146150 CCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185 |||||||||| || || || | || ||||| |||| Sbjct 475565 CCCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGG 475530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589944121231520