Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 149 6e-31
seq722 143 3e-29
seq990 132 5e-26
seq4 93.3 4e-14
>seq2100
Length=111253
Score = 149 bits (164), Expect = 6e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||||||||||||| | || || ||| ||| |
Sbjct 23386 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAAACCATCACCCTGGAGGTGGAACCCAGC 23327
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| ||||| | || || |||||||||||| | |||||
Sbjct 23326 GACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCA 23268
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || ||||| |||||||| || | |||||||| ||||||||
Sbjct 23267 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTACAA 23208
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||| || | || || || || || | || ||||||| |||
Sbjct 23207 CATCCAGAAAGAATCTACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGC 23159
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| ||||||||| | || || || ||| |
Sbjct 23614 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 23555
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | || || |||||||||||| | || ||
Sbjct 23554 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGATCA 23496
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || || || |||||||| || | |||||||| ||||||||
Sbjct 23495 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 23436
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| |||| || || || || | || | ||||| |||
Sbjct 23435 CATCCAGAAGGAGTCCACCCTTCACCTGGTCCTCCGTCTCAGGGGTGGC 23387
Score = 134 bits (148), Expect = 1e-26
Identities = 171/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || || || || || ||||| ||||||||||||||| | || || || |
Sbjct 23846 AAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGCC 23787
Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
|| ||||| | | | |||| |||||| ||||| | || || |||||||||||| | |
Sbjct 23786 CAGCGACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTG 23728
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
||||||| | || |||| || || || |||||||| || | |||||||| ||||
Sbjct 23727 ACCAGCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACT 23668
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||| ||||| || || |||| || || || || | || ||||||| |||
Sbjct 23667 ACAATATCCAAAAAGAATCCACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGC 23615
Score = 129 bits (142), Expect = 6e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || || || ||||| ||||| ||||||||||||||| | || || || ||
Sbjct 27807 AAGATGCAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCC 27748
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | | |||| || || | || || |||||||||||| | |||
Sbjct 27747 AGTGACACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGAC 27688
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| | || |||| || || || |||||||| || | |||||||| |||||||
Sbjct 27687 CAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTAC 27628
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| || |||| || || || || | || | ||||| |||
Sbjct 27627 AACATCCAGAAAGAATCCACACTCCACCTGGTCCTCCGTCTCAGGGGTGGC 27577
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||||||||||||| | || || || |||
Sbjct 27576 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTTGAGCCCAGT 27517
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | || || |||||||||||| | |||||
Sbjct 27516 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCA 27458
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || || || |||||||| || | |||||||| ||||||||
Sbjct 27457 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTACAA 27398
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||| || || | || || || || || | || ||||||| |||
Sbjct 27397 CATCCAAAAAGAATCTACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGC 27349
>seq722
Length=280156
Score = 143 bits (158), Expect = 3e-29
Identities = 173/233 (74%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || ||||| ||||| ||||| || || ||||||||| | || || || |
Sbjct 191950 AAAGATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCC 192009
Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
|| || | | | | |||| | |||| ||| |||| || ||||| ||||| || | |
Sbjct 192010 CAGTGATACCATTGAGAACG-TGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTG 192068
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
||||||| | || |||| || || ||||||||||| || | |||||||| ||||
Sbjct 192069 ACCAGCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACT 192128
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||| |||||||||||| |||| || || || ||| | ||| ||||||| |||
Sbjct 192129 ACAATATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGAGGC 192181
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| ||||| || || || |||||| | || || || |||
Sbjct 192182 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACTATCACCCTGGAGGTGGAGCCCAGT 192241
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | |||| ||| |||| || ||||| | ||| || | |||||
Sbjct 192242 GATACCATTGAGAACG-TGAAGGCAAAGATTCAGGATAAAGAAGACATTCCTCCTGACCA 192300
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || || ||||||||||| || | |||||||| ||||| ||
Sbjct 192301 GCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTAAAA 192360
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||| |||| || || || ||| | || ||||||| ||
Sbjct 192361 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCTGCCTGAGGGGAGG 192408
>seq990
Length=431866
Score = 132 bits (146), Expect = 5e-26
Identities = 104/122 (85%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 116685 AGGTGGACCTGTCCAAGGACACG-AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCAT 116743
|||||||||||||||| ||| | ||| |||||||| | |||| ||| |||||||| |
Sbjct 237749 AGGTGGACCTGTCCAAAGACCTGCAGC-ACTGGGAGTCCCTGAAGGACGACGAGCGCTAC 237807
Query 116744 TTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTG 116803
|||||| |||||| ||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 237808 TTCATCTCCCACGTGTTGGCCTTCTTCGCCGCCAGCGACGGCATCGTCAACGAGAACCTG 237867
Query 116804 GT 116805
||
Sbjct 237868 GT 237869
Score = 111 bits (122), Expect = 2e-19
Identities = 96/117 (82%), Gaps = 4/117 (3%)
Strand=Plus/Plus
Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862
||| ||||| ||| | ||||||||||||||| | ||||| |||| ||||||||||| ||
Sbjct 237949 GGTGGAGCGCTTCACGCAGGAGGTGCAGGTGACAGAGGCCAGGTGTTTCTACGGCTTCCA 238008
Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACC--CTCATCGACACGTAC 116917
|||||||||||||||| | ||||| || ||||| | || ||||||||||| |||
Sbjct 238009 GATCGCCATGGAGAACATCCACTCTGAGATGTA--CAGCCTGCTCATCGACACCTAC 238063
Score = 105 bits (116), Expect = 7e-18
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||||||||| || || || ||||| ||||||| || || ||||||||||| || |
Sbjct 238338 TGGTGGCCTTTGCTGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCCGCCATCTTCT 238397
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| | ||||| ||||| ||||| || |||||||||||||||||| | |
Sbjct 238398 GGCTGAAGAAGAGAGGCCTGATGCCTGGCCTAACCTTCAGCAACGAGCTCATCAGTCGAG 238457
Query 117162 ACGAGG 117167
||||||
Sbjct 238458 ACGAGG 238463
>seq4
Length=1291530
Score = 93.3 bits (102), Expect = 4e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091
|| ||||| || ||||| ||||| || || ||||| | ||||| || ||| |||||
Sbjct 279571 GGGGAGCGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATTTTCTTCTCAGGCTCATTCGCT 279512
Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151
|| || | ||||| ||||| | ||||||||||| ||||| || | | |||||| |||
Sbjct 279511 GCTATCTACTGGCTGAAGAAGAGAGGCCTCATGCCAGGCCTTACCTACTCCAACGAACTC 279452
Query 117152 ATCTCCAGGGACGAGG 117167
|| |||||||||||
Sbjct 279451 ATTAGCAGGGACGAGG 279436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515103352962880
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