Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 127 2e-24
seq1334 107 2e-18
seq1848 104 3e-17
seq3119 102 9e-17
seq1704 102 9e-17
seq524 98.7 1e-15
seq14227 95.1 1e-14
seq10171 95.1 1e-14
seq4076 95.1 1e-14
seq4995 89.7 6e-13
>seq2100
Length=111253
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| ||||| |||||||| |||| ||| || || | || || |||||||| ||||| ||
Sbjct 23652 TCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAG 23711
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | ||||||||| | || | || |||||| ||| |||||| |||| ||
Sbjct 23712 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTC 23771
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||||| | ||||| || | |||||||||||||| || || ||||| |||
Sbjct 23772 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACA 23831
Query 43173 AAGATTTGCATTTTTACG 43190
||||| ||||| ||| ||
Sbjct 23832 AAGATCTGCATGTTTGCG 23849
Score = 111 bits (122), Expect = 2e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| || || || ||||| |||| || || || | || || |||||||| ||||| ||
Sbjct 23196 TCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 23255
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | ||||||||| | || | || |||||| ||| |||||| |||| ||
Sbjct 23256 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTC 23315
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||||| | |||||| || | |||||||||||||| || || ||||| ||
Sbjct 23316 TCAATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACG 23375
Query 43173 AAGATTTGCAT 43183
||||| |||||
Sbjct 23376 AAGATCTGCAT 23386
Score = 93.3 bits (102), Expect = 5e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| ||||| || ||||| |||| || || || | || || |||||||| || || ||
Sbjct 27386 TCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAG 27445
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | ||||||||| | || | || |||||| ||| ||| || |||| ||
Sbjct 27446 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTC 27505
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||| || | || || || | |||||||||||||| || || ||||| ||
Sbjct 27506 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACG 27565
Query 43173 AAGATTTGCAT 43183
||||| |||||
Sbjct 27566 AAGATCTGCAT 27576
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||| | |||| || | |||| || || || || ||||| || | |
Sbjct 27578 CCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGAC 27637
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || |||||||| || || || || || | ||||||||| | ||
Sbjct 27638 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 27697
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || |||||| ||| ||| || || | || | | ||||| || | |||||
Sbjct 27698 ATGCCCTCCTTATCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACC 27757
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|| | |||||||||||||| || || || || |||||||| ||||| ||
Sbjct 27758 TCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCTT 27807
>seq1334
Length=181190
Score = 107 bits (118), Expect = 2e-18
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
||||||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 112438 ATTTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 112497
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 112498 CACTATACTAACGAGGA 112514
>seq1848
Length=131990
Score = 104 bits (114), Expect = 3e-17
Identities = 76/88 (86%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 60053 TATGAAAAATTTT---CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCG 60109
||||||||| || |||| || | ||||||||||||| ||||||||||||||||||||
Sbjct 44176 TATGAAAAAGTTGTGCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCG 44117
Query 60110 GACATACTCACCACTATACTACCGAGGA 60137
| |||||||||||||||||| ||||||
Sbjct 44116 GGGATACTCACCACTATACTAACGAGGA 44089
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 61759 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 61700
Query 60126 TACTACCGAGGATTG 60140
||||| |||||| ||
Sbjct 61699 TACTAACGAGGAATG 61685
>seq3119
Length=59180
Score = 102 bits (112), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 43817 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 43758
Query 60126 TACTACCGAGGATTGA 60141
||||| |||||| |||
Sbjct 43757 TACTAACGAGGAGTGA 43742
>seq1704
Length=143687
Score = 102 bits (112), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
||| |||| || | ||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 96031 TTTACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 95972
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 95971 ACTATACTAACGAGGA 95956
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 76631 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 76572
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 76571 TACTAACGAGGA 76560
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 94653 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 94594
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 94593 TACTAACGAGGA 94582
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 95397 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 95338
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 95337 TACTAACGAGGA 95326
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/77 (86%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
||| |||||| | ||||||||||||| ||||||||||||||||||| | ||||||||
Sbjct 62489 ATTCTCTCCTTCG--GGGAATCGAACCCCGGTCTCCCGCGTGACAGGCAGGGATACTCAC 62432
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| |||||
Sbjct 62431 CACTATACTAATGAGGA 62415
>seq524
Length=327331
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 302069 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 302010
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 302009 TACTAACGAGGA 301998
>seq14227
Length=393
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 53 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 112
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 113 TACTAACGAGGA 124
>seq10171
Length=786
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 494 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 435
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 434 TACTAACGAGGA 423
>seq4076
Length=31007
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 13959 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 13900
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 13899 TACTAACGAGGA 13888
>seq4995
Length=15865
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct 834 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 893
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 894 TACTAACGAGGA 905
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct 8026 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 8085
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 8086 TACTAACGAGGA 8097
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct 14557 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 14616
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 14617 TACTAACGAGGA 14628
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||||||||| |||||||| |||||||||||| ||||| |||||||
Sbjct 7614 CTCCCCGTCGGGGAATCGAACCACGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 7673
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 7674 TACTAACGAGGA 7685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571689026812640
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