Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq345 273 2e-68
seq461 102 6e-17
>seq345
Length=387903
Score = 273 bits (302), Expect = 2e-68
Identities = 595/875 (68%), Gaps = 18/875 (2%)
Strand=Plus/Minus
Query 107694 AGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAA 107753
||| | || |||||| | || || ||||| ||||| |||||| |||| |||||||| ||
Sbjct 261309 AGTGAGGAGGAGCTAAATTTTCCTATTGCATACTCCATGGTGATCCACGAGAAGATAGAG 261250
Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813
| |||||||| || || ||| | | ||||| || |||||||| ||||| ||||| |
Sbjct 261249 ATGTTTGAACGACTCCTACGATCTATTTATGCTCCGCAGAACATCTACTGCGTCCATATT 261190
Query 107814 GATGTGAAGTCCCCAGAGACTTT-CAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCC 107872
|| |||||| | | |||| || || ||| || || | | |||||||||| ||
Sbjct 261189 GACCAGAAGTCTTCCCCGTCTTTTCACAG-GGCTGTGAAAGAAGTAGTTTCCTGCTTTCC 261131
Query 107873 CAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCA 107932
|||||| || | |||||||| || | || || ||||| || ||||||||||||||
Sbjct 261130 CAATGTTTTTGTAGCCAGTAAATTAGAAAGTGTCGTGTATGCTTCATGGTCCAGAGTGCA 261071
Query 107933 AGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTC---AGTGCCATGGAAGTACTT 107989
|| || |||||||| ||| |||| |||| || ||| ||| | ||||| ||| |
Sbjct 261070 GGCAGATCTGAACTGCATGAAAGATCTGCTGCA---CTCTGAAGTTCGGTGGAAATACCT 261014
Query 107990 ACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCT 108049
||||||| || ||||||||||| ||||| || |||||| |||||||| |||| ||
Sbjct 261013 TTTGAATACCTGTGGGACAGACTTTCCCATCAAAACCAATAGGGAGATGGTGATGGCTCT 260954
Query 108050 CAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaa 108109
|| | | || || | |||||| ||||| |||| || | || ||||| |||
Sbjct 260953 GAAAGTCCTCAATGGGAGGAACAGCATGGAAACTGAAGTCACCAGTGTCTCCAAGAAAGG 260894
Query 108110 TCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAG-CAAGATGAAGG 108168
||||||| | |||| | | | || || || | | | | ||| | || |||
Sbjct 260893 TCGCTGGCAGTACCACCACAATGTCACCAAC-GGCGTCATCAGAACAGACGTGA-GAAAA 260836
Query 108169 ACCCTCCCCCTGATAATTTACCC-ATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGA 108227
| || || | || | | ||| |||||| |||| || ||||| ||||||| |||| |
Sbjct 260835 AGCCCGCCGCCCATCAGTAGCCCAATGTTCTCAGGAAACGCCTACTTTGTGGTCTCTAGG 260776
Query 108228 GCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAA 108287
|||||||| || | || | | ||| | || | | | | ||||||| |||
Sbjct 260775 GCCTTTGTGAAATACGTGATGCAGAACAGAGAGGTTCAGAAATTCATGGAATGGGAAAAA 260716
Query 108288 GACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGATGC 108345
||||| || || || ||||||||| | ||||||||||| ||| | || ||| | | | |
Sbjct 260715 GACACATACAGTCCAGACGAACACATGTGGGCCACCCTGCAGAGGATG-TCC-TCGGTTC 260658
Query 108346 CTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGC 108405
|||| || || || || ||| ||| ||| ||||||||| || ||||| |
Sbjct 260657 CTGGATCAGTGCCCCCAAACGGCAAATATGACACGTCAGACATGCTGGCTCTCGCCCGAG 260598
Query 108406 TCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCT 108465
||||||||||| || ||||| || | | || || || || || ||
Sbjct 260597 TCGTCAAGTGGTCTTATTTAACAGGAGACGTGAAAAAAGGAGCTCCGTACTATCCGTGTA 260538
Query 108466 CTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCC 108525
| || | | | |||| ||| | || | || || ||||| ||||| ||| | ||
Sbjct 260537 CGGGGACCTACAGGAGAGCCGTGTGTGTGTATGGCGCCGGCGACCTCCTGTGGCTCCT-G 260479
Query 108526 AGA-ACCATCACCTCTTGGCAAACAAGTTTGACCC 108559
||| | || |||||||| ||||| |||||||||||
Sbjct 260478 AGACAGCAGCACCTCTTTGCAAATAAGTTTGACCC 260444
>seq461
Length=347704
Score = 102 bits (112), Expect = 6e-17
Identities = 191/278 (69%), Gaps = 6/278 (2%)
Strand=Plus/Plus
Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813
||||||||||| ||||| |||||| | || || ||||||||||| || ||| | || |||
Sbjct 245600 AACTTTGAACGACTGCTACGAGCCATCTACGCACCTCAGAACATTTATTGTATTCATGTG 245659
Query 107814 GATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCC 107873
|| || |||| || | |||| || | | ||| | ||||| ||||||
Sbjct 245660 GACAAAAAATCCCAGCCCTCTGTAAAAGCTGCCATTACCAGCATCGTGTCCTGTTTCCCC 245719
Query 107874 AATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAA 107933
||||||||||||| | | || || |||||||| || ||| | | || |||
Sbjct 245720 AATGTCTTCATGGTCGGACAGGCTGTGAGTGTGGTTTACGCTGGGTGGCCTCGTGTCCAA 245779
Query 107934 GCTGACCTGAACTGTATGGAAGACTTGCTCCA-GAGCTCAGTGC--CATGGAAGTACTTA 107990
|||||||| ||||| |||| ||| ||| | || | |||||| ||||| |||||
Sbjct 245780 GCTGACCTCAACTGCATGGCTGAC---CTCTATGAACGCAGTGCAGAGTGGAAATACTTC 245836
Query 107991 CTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028
| || ||||| ||||||||| |||| |||||
Sbjct 245837 ATCAACCTCTGCGGACAAGACTTCCCTCTAAAAACCAA 245874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348192449466312
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