Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq86 156 9e-33
>seq86
Length=659436
Score = 156 bits (172), Expect = 9e-33
Identities = 639/1005 (64%), Gaps = 42/1005 (4%)
Strand=Plus/Plus
Query 248437 GACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGT 248496
|| |||||| | || ||| | ||||| |||||| | | |||||| ||||||| ||
Sbjct 243845 GATGGGCGCCAGGAGCGCGTCATGTTCGATAAAATCACCTCCCGCATCCAGAAGCTTTGC 243904
Query 248497 TATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGC 248556
|| || ||| | || |||| || |||| | ||| || ||| || || ||||
Sbjct 243905 TACGGCCTGAACCCGGACTTTGTGGATCCGGCTCAGATCACCATGAAGGTGATCCAGGGC 243964
Query 248557 GTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGACGGCGGCGTAC 248616
| |||| ||| || || || || || ||||| |||| ||||||| ||||| |
Sbjct 243965 TTGTACAGCGGCGTCACCACCGTGGAGCTAGACACGCTAGCGGCGGAGATCGCGGCCACC 244024
Query 248617 ATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCGGGAGGATCGCCGTCTCAAGGCTT 248676
|| ||| ||||||||||||| | | ||||||| |||||| |||||||| | ||
Sbjct 244025 CTGACGACCAAACACCCCGACTACGCCATCCTGGCCGCGAGGATTGCCGTCTCCAACCTG 244084
Query 248677 CACAAAGAAACGAAAGAGTCGTTCGTCGAAACCATGGCTGACCTACATGCCTATG----- 248731
||||| || || || || |||| ||| |||| ||||| ||||| |
Sbjct 244085 CACAAGGAGACCAAGAAGGTGTTCAGCGAGGTGATGGAAGACCTGTTCGCCTACGTCAAC 244144
Query 248732 -------------GG---------ATGGTCGCC--GATGACG-TCCACACCGTCATTCAG 248766
|| ||| || || | |||| || ||| |||||| |
Sbjct 244145 CCTCTGAACAAACGGCACTCTCCCATGATCTCCAAGGAGACGCTCGACATCGTCAT---G 244201
Query 248767 GACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTC 248826
|| ||| | ||| ||| | | | || || | || |||||| ||| | |||
Sbjct 244202 GAAAACAAGGACCGCCTTAATTCCTCCATCATTTATGACAGAGATTTCTCCTACAACTTC 244261
Query 248827 TTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAA 248886
|| | |||||| || |||||| || || || || || || | || || | | ||
Sbjct 244262 TTCGGTTTCAAGACTCTGGAGCGCTCCTACCTGCTGAAGATCAACGGGAAAGTGGCCGAG 244321
Query 248887 CGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC 248946
|| ||||||||| | ||| | ||| | || ||||| ||| | ||||| || ||
Sbjct 244322 CGGCCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATCGA-CGC 244380
Query 248947 GTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGC 249004
||| ||||||| |||| | || || ||| | || || ||| | ||||| |
Sbjct 244381 -TGCCATCGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACGCCTCTCCGACCC 244439
Query 249005 TCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAG 249064
||||||||||||| ||| | |||||| | ||||| || || ||||| | |
Sbjct 244440 TCTTCAACGCCGGGACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGG 244499
Query 249065 ACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCG 249124
||||| |||| ||||| || ||||| || || ||| ||| ||||| || | ||
Sbjct 244500 ACGACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCG 244559
Query 249125 CGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTA 249184
| ||||| ||||| | | || | ||||||| ||| ||| |||||| || |
Sbjct 244560 CTGGCGGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGAAGCTACATCGCTGGCA 244619
Query 249185 CAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGT 249244
| || || | | || | || || | || || | | ||| || | |
Sbjct 244620 CCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCTCGCT 244679
Query 249245 TCATCAACCAGGCCGGGCGCCGAAAG----GGGTCGTTCGCCATGTATTTGGAAGTGTGG 249300
| || |||||| | ||| | | || ||| | ||||||||||| ||||| ||||
Sbjct 244680 ACGTCGACCAGGGC-GGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAACCGTGG 244738
Query 249301 CACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGA 249360
||| ||| | || || |||||||| |||| ||||||| || || ||| ||||
Sbjct 244739 CACTTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGA 244798
Query 249361 GCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405
|| | ||||| ||||||| | ||||| || | ||| ||||||||
Sbjct 244799 GCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATG 244843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073518927715584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |